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WormBase Tree Display for Gene: WBGene00010774

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Name Class

WBGene00010774SMapS_parentSequenceK11E4
IdentityVersion2
NameCGC_nameshc-3Person_evidenceWBPerson3668
Laboratory_evidenceLMN
Sequence_nameK11E4.2
Molecular_nameK11E4.2a
K11E4.2a.1
CE34056
K11E4.2b
CE54562
K11E4.2b.1
Other_nameK11E4.2
CELE_K11E4.2Accession_evidenceNDBBX284606
Public_nameshc-3
DB_infoDatabaseAceViewgeneXO337
WormQTLgeneWBGene00010774
WormFluxgeneWBGene00010774
NDBlocus_tagCELE_K11E4.2
NCBIgene187296
RefSeqproteinNM_077894.7
NM_001420579.1
TrEMBLUniProtAccQ21429
A0A9J5HVD6
UniProt_GCRPUniProtAccQ21429
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
203 Oct 2022 14:55:54WBPerson21950Name_changeCGC_nameshc-3
Other_nameK11E4.2
StatusLive
Gene_info (6)
Molecular_infoCorresponding_CDSK11E4.2a
K11E4.2b
Corresponding_CDS_historyK11E4.2:wp101
Corresponding_transcriptK11E4.2a.1
K11E4.2b.1
Associated_featureWBsf648688
WBsf717393
WBsf236604
WBsf236605
Experimental_infoRNAi_resultWBRNAi00050603Inferred_automaticallyRNAi_primary
WBRNAi00034288Inferred_automaticallyRNAi_primary
WBRNAi00060437Inferred_automaticallyRNAi_primary
WBRNAi00017014Inferred_automaticallyRNAi_primary
WBRNAi00060439Inferred_automaticallyRNAi_primary
WBRNAi00060438Inferred_automaticallyRNAi_primary
WBRNAi00060440Inferred_automaticallyRNAi_primary
Expr_patternExpr3617
Expr1023353
Expr1154311
Expr2005067
Expr2023287
Drives_constructWBCnstr00031157
Construct_productWBCnstr00011542
WBCnstr00031157
Microarray_results (18)
Expression_clusterWBPaper00032425:down_in_alg-1
WBPaper00032425:down_in_rde-4
WBPaper00032425:down_in_zfp-1
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_CoreEnriched
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00044736:oscillating_dev_expression
WBPaper00045017:blmp-1(tm548)_downregulated
WBPaper00045050:csr-1(hypomorph)_upregulated
WBPaper00045257:bar-1(ga80)_downregulated
WBPaper00045571:germline-ablation_upregulated
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00049334:CE_intestine_enriched
WBPaper00049484:elt-2(RNAi)_downregulated_L4
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_downregulated
WBPaper00049905:Age_variant_expression
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053295:lin-22(ot267)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053402:his-3(RNAi)_downregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00055226:ADR-2_target_adr-1(tm668)
WBPaper00055226:ADR-2_target_N2
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00057068:Cadmium_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060703:nas-38(ok3407)_downregulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Neuroblast_AIZ_FLP_RMG
WBPaper00061340:URX
WBPaper00061341:28C_24h_upregulated
WBPaper00061527:gtl-1-hum-8_16432
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062347:blmp-1(tm548)_downregulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065199:Transgeneration-starvation_regulated_fed
WBPaper00065288:mdt-15(tm2182)_downregulated
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00026980:intestine_enriched
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_I
WBPaper00038060:SUMO-1_downregulated
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038304:octr-1_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc6390]:Cluster_A
[cgc6390]:herm_soma-enriched
InteractionWBInteraction000291449
WBInteraction000367614
WBInteraction000377861
WBInteraction000382359
WBInteraction000407100
WBInteraction000411754
WBInteraction000425784
WBInteraction000445810
WBInteraction000459988
Map_infoMapXPosition14.4492
PositivePositive_cloneK11E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00062854
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene