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WormBase Tree Display for Gene: WBGene00010615

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Name Class

WBGene00010615SMapS_parentSequenceK07A1
IdentityVersion2
NameCGC_nameate-1Person_evidenceWBPerson237
Sequence_nameK07A1.9
Molecular_name (18)
Other_nameCELE_K07A1.9Accession_evidenceNDBBX284601
Public_nameate-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2016 15:57:39WBPerson2970Name_changeCGC_nameate-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classate
Allele (52)
RNASeq_FPKM (74)
GO_annotation00002573
00002574
00002575
00002576
00002577
00002578
00117969
00117970
Contained_in_operonCEOP1552
Ortholog (35)
Structured_descriptionAutomated_descriptionPredicted to enable arginyl-tRNA--protein transferase activity. Predicted to be located in cytoplasm. Is an ortholog of human ATE1 (arginyltransferase 1).Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK07A1.9a
K07A1.9b
K07A1.9c
K07A1.9d
K07A1.9e
K07A1.9f
Corresponding_CDS_historyK07A1.9:wp90
Corresponding_transcriptK07A1.9a.1
K07A1.9b.1
K07A1.9c.1
K07A1.9d.1
K07A1.9e.1
K07A1.9f.1
Other_sequence (38)
Associated_featureWBsf649499
WBsf984762
WBsf984763
WBsf220112
Experimental_infoRNAi_resultWBRNAi00116968Inferred_automaticallyRNAi_primary
WBRNAi00003947Inferred_automaticallyRNAi_primary
WBRNAi00034035Inferred_automaticallyRNAi_primary
WBRNAi00050094Inferred_automaticallyRNAi_primary
WBRNAi00050083Inferred_automaticallyRNAi_primary
Expr_patternExpr1022179
Expr1034635
Expr1153796
Expr2009478
Expr2027715
Drives_constructWBCnstr00031285
Construct_productWBCnstr00031285
Microarray_results (32)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049217:TCER-1_downregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00050344:ASER-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:15C_downregulated_OP50
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055648:germline_expressed
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:SGP_biased
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058691:WDR-5.1_interacting_protein
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00059754:C.neoformans_H99_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060459:bcat-1(RNAi)_downregulated
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00061340:I2_grandparent
WBPaper00061340:M1_parent
WBPaper00061340:M4_parent
WBPaper00061340:Neuroblast_AWC_SAAVx
WBPaper00061340:Neuroblast_PVC_LUA
WBPaper00061466:nath-10(icb99)_upregulated
WBPaper00061466:nath-10(icb102)_upregulated
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:cids-2_2203-attf-2_2451
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00025032:cluster_151
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00032948:StarveUp3
WBPaper00035560:ahr-1_upregulated
WBPaper00035905:FBF-1_Associated
WBPaper00037147:heatshock_upregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_23
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MDE
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_ME
[cgc6390]:Cluster_E
[cgc6390]:herm_sex-enriched
Interaction (30)
Map_infoMapIPosition3.80752
PositivePositive_cloneK07A1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064339
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene