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WormBase Tree Display for Gene: WBGene00007733

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Name Class

WBGene00007733SMapS_parentSequenceC25G4
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classsmz
Allele (18)
StrainWBStrain00033243
RNASeq_FPKM (74)
GO_annotation00060361
00060362
00060363
Ortholog (35)
Paralog (14)
Structured_descriptionConcise_descriptionsmz-1 encodes a PDZ domain-containing protein; SMZ-1 activity is required for spermatocytes to progress through meiotic divisions, and specifically for meiotic chromosome segregation; SMZ-1 localizes to spermatogenic meiotic chromosomes and mature sperm chromatin.Paper_evidenceWBPaper00028451
Curator_confirmedWBPerson1843
WBPerson324
Date_last_updated11 Nov 2014 00:00:00
Automated_descriptionInvolved in male meiosis chromosome segregation. Part of chromatin. Expressed in male gonad and sperm.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC25G4.6
Corresponding_transcriptC25G4.6.1
Other_sequence (29)
Associated_featureWBsf229296
Experimental_infoRNAi_resultWBRNAi00011182Inferred_automaticallyRNAi_primary
WBRNAi00041215Inferred_automaticallyRNAi_primary
WBRNAi00022623Inferred_automaticallyRNAi_primary
WBRNAi00029205Inferred_automaticallyRNAi_primary
Expr_patternExpr4210
Expr9250
Expr1021333
Expr1033348
Expr1145251
Expr2015932
Expr2034165
Drives_constructWBCnstr00033525
Construct_productWBCnstr00033525
AntibodyWBAntibody00001147
WBAntibody00001148
Microarray_results (21)
Expression_clusterWBPaper00028451:Abundant_spermatogenesis_enriched
WBPaper00029047:atx-3_upregulated
WBPaper00031070:rrf-3_eri-1_upregulated
WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
WBPaper00035211:age-1_vs_age-1_upregulated
WBPaper00037682:sma-2_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00041954:ethanol_upregulated
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042477:prp-8(RNAi)_downregulated_RNAseq
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044260:nicotinc-acid_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00044760:germline_specific
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045521:Spermatogenic
WBPaper00045729:gld-2(RNAi)_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048611:MnCl2_downregulated
WBPaper00048762:FOG-3_associated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00050231:male_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00051265:F1_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053599:female_vs_male_downregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053657:JU2519_M.humicola-infection_24hr
WBPaper00053771:up_at_24h-NaCl
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056039:ptl-1(ok621)_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:flcn-1(ok975)_downregulated
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_PA14
WBPaper00058948:PA14_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059426:Ag-nanoparticles_upregulated
WBPaper00059426:SiO2-nanoparticles_upregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059739:hira-1(gk835598)_downregulated_adult
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060526:plp-1(ok2155)_upregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00060911:prx-5(RNAi)_downregulated_mRNA
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tbh-1(ok1196)_downregulated
WBPaper00060921:tph-1(mg280)_downregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061466:nath-10(icb99)_upregulated
WBPaper00061466:nath-10(icb102)_upregulated
WBPaper00061478:pie-1(ne4433)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:prg-1(tm872)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:F07A5.2-R10E9.2
WBPaper00061651:Sperm_enriched
WBPaper00061853:osm-3(dh441)_downregulated
WBPaper00061853:osm-3(dh441)_downregulated_tunicamycin
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00064999:miR-229-64-65-66_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_upregulated_N2
WBPaper00065841:3_3
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066085:sin-3(tm1276)_downregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
cgc4489_group_25
WBPaper00025099:MA_specific
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00027342:alpha-Synuclein(WT)_upregulated
WBPaper00028789:PA14_vs_OP50_downregulated_8hr
WBPaper00031184:acrylamide_upregulated
WBPaper00033101:spr-5_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00035891:zip-2(RNAi)_downregulated
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_E
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00037113:CPF_16C_down-regulated
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q50_up
WBPaper00040963:Q100_up
WBPaper00040963:Q200_up
WBPaper00040963:TA100_up
WBPaper00040963:TA200_up
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00051387:Triclosan_downregulated
[cgc6390]:Cluster_D
[cgc6390]:spermatogenesis-enriched
Interaction (274)
Map_infoMapIVPosition5.96655
PositivePositive_cloneC25G4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028451
WBPaper00032233
WBPaper00035199
WBPaper00052036
WBPaper00057218
WBPaper00057785
WBPaper00064502
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene