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WormBase Tree Display for Gene: WBGene00003408

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Name Class

WBGene00003408SMapS_parentSequenceF57C12
IdentityVersion1
NameCGC_namemrp-2Person_evidenceWBPerson490
Sequence_nameF57C12.4
Molecular_nameF57C12.4
F57C12.4.1
CE26370
Other_nameCELE_F57C12.4Accession_evidenceNDBBX284606
Public_namemrp-2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoPotential_model (13)
Molecular_infoCorresponding_CDSF57C12.4
Corresponding_transcriptF57C12.4.1
Other_sequence (28)
Associated_featureWBsf034317
WBsf670064
WBsf1003807
WBsf1003808
WBsf1022144
WBsf1022145
WBsf236931
Experimental_infoRNAi_resultWBRNAi00097976Inferred_automaticallyRNAi_primary
WBRNAi00048850Inferred_automaticallyRNAi_primary
WBRNAi00015883Inferred_automaticallyRNAi_primary
Expr_pattern (7)
Drives_constructWBCnstr00002777
Microarray_results (21)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00032976:dosage_compensated_genes
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037682:sma-2_upregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040134:nhr-49(RNAi)_regulated_protein
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040560:hpl-2_embryo_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044037:eat-2_downregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044316:HgCl2_20uM_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050344:PLM-neuron_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:body-muscle_enriched
WBPaper00050990:body-muscle_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
WBPaper00051245:pharyngeal-muscle_nucleus_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00052987:UV_upregulated_xpc-1;csb-1
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053664:ins-11(tm1053)_downregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:25C_downregulated_OP50
WBPaper00054192:cold-shock_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055941:atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056039:efa-6(tm3124)_upregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:SGP_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059117:B.subtilis_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059604:fluvastatin_downregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_downregulated_N2
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061340:AMsh
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061340:OLQ
WBPaper00061340:RIH
WBPaper00061527:acy-2-F35C5.11
WBPaper00061651:VB01_enriched
WBPaper00061692:acivicin_upregulated
WBPaper00061902:camt-1(ok515)_regulated_BAG
WBPaper00061902:CAMT-1_interacting
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:etr-1(lq61)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062520:qui-1(db104)_upregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064291:antimycin_upregulated
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00065373:sek-1(km4)_downregulated_Ref
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:13_0
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_transcript
WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_23
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00034757:up_by_oxidative_stress
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_F
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040963:TA100_up
WBPaper00040963:TA200_up
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042067:Cu2+_upregulated_WT
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00047070:DAF-16-dependent_UV_response
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00050515:nipi-3(fr4)_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_B
Interaction (48)
Map_infoMapXPosition-19.6347Error0.009197
PositivePositive_cloneF57C12Person_evidenceWBPerson4545
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00002619
WBPaper00002828
WBPaper00005859
WBPaper00006402
WBPaper00015187
WBPaper00031484
WBPaper00035475
WBPaper00038491
WBPaper00039063
WBPaper00041340
WBPaper00048852
WBPaper00053367
WBPaper00055090
WBPaper00056826
WBPaper00064023
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene