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WormBase Tree Display for Gene: WBGene00007014

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Name Class

WBGene00007014EvidenceAuthor_evidenceBourbon H-M
SMapS_parentSequenceT09A5
IdentityVersion1
NameCGC_namemdt-10
Sequence_nameT09A5.6
Molecular_nameT09A5.6
T09A5.6.1
CE51730
Other_nameCELE_T09A5.6Accession_evidenceNDBBX284602
Public_namemdt-10
DB_infoDatabaseAceViewgene2I144
WormQTLgeneWBGene00007014
WormFluxgeneWBGene00007014
NDBlocus_tagCELE_T09A5.6
PanthergeneCAEEL|WormBase=WBGene00007014|UniProtKB=P45966
familyPTHR13345
NCBIgene188311
RefSeqproteinNM_063249.9
SwissProtUniProtAccP45966
TREEFAMTREEFAM_IDTF315096
UniProt_GCRPUniProtAccP45966
SpeciesCaenorhabditis elegans
HistoryVersion_change114 May 2004 11:48:16WBPerson1845EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmdt
Allele (27)
RNASeq_FPKM (74)
GO_annotation00046167
00046168
00046169
00046170
00046171
00115205
00115206
00115207
Contained_in_operonCEOP2312
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to enable transcription coregulator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Is an ortholog of human MED10 (mediator complex subunit 10).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST09A5.6
Corresponding_CDS_historyT09A5.6:wp254
Corresponding_transcriptT09A5.6.1
Other_sequenceCBC02844_1
JI217423.1
CJC06269_1
CBC10135_1
Associated_featureWBsf223404
Experimental_infoRNAi_resultWBRNAi00087234Inferred_automaticallyRNAi_primary
WBRNAi00035377Inferred_automaticallyRNAi_primary
WBRNAi00112422Inferred_automaticallyRNAi_primary
WBRNAi00093814Inferred_automaticallyRNAi_primary
WBRNAi00072626Inferred_automaticallyRNAi_primary
WBRNAi00072627Inferred_automaticallyRNAi_primary
WBRNAi00074724Inferred_automaticallyRNAi_primary
WBRNAi00009144Inferred_automaticallyRNAi_primary
WBRNAi00117664Inferred_automaticallyRNAi_primary
WBRNAi00085240Inferred_automaticallyRNAi_primary
WBRNAi00074717Inferred_automaticallyRNAi_primary
WBRNAi00072628Inferred_automaticallyRNAi_primary
WBRNAi00026249Inferred_automaticallyRNAi_primary
WBRNAi00074718Inferred_automaticallyRNAi_primary
WBRNAi00074722Inferred_automaticallyRNAi_primary
WBRNAi00093817Inferred_automaticallyRNAi_primary
WBRNAi00074721Inferred_automaticallyRNAi_primary
WBRNAi00112413Inferred_automaticallyRNAi_primary
WBRNAi00065757Inferred_automaticallyRNAi_primary
WBRNAi00093820Inferred_automaticallyRNAi_primary
WBRNAi00052924Inferred_automaticallyRNAi_primary
WBRNAi00074719Inferred_automaticallyRNAi_primary
WBRNAi00074723Inferred_automaticallyRNAi_primary
WBRNAi00074720Inferred_automaticallyRNAi_primary
Expr_patternExpr1027997
Expr1033004
Expr1156526
Expr2013469
Expr2031703
Drives_constructWBCnstr00034037
Construct_productWBCnstr00034037
AntibodyWBAntibody00001835
Microarray_results (21)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032097:CGH-1-associated-mRNA
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_embryo_enriched
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045050:csr-1(hypomorph)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
WBPaper00048762:FOG-3_associated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:intestine_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:germline_enriched
WBPaper00051257:Levamisole_upregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00061340:Parents_of_U_F_B_DVA
WBPaper00061527:cyn-10_19153-K12H4.2
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065158:AFD_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026980:intestine_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_5
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_F
WBPaper00037611:RNP-8-associated
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00039866:SAM_daf-19_downregulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_allantoin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
[cgc5767]:cluster_14
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(122_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MDE
[cgc5767]:expression_class_MD_pd(23_min)
[cgc5767]:expression_class_ME
[cgc6390]:oogenesis-enriched
Interaction (20)
Map_infoMapIIPosition0.585882Error0.000206
PositivePositive_cloneT09A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00003858
WBPaper00004853
WBPaper00006530
WBPaper00027707
WBPaper00029038
WBPaper00031331
WBPaper00038491
WBPaper00055090
WBPaper00065308
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene