WormBase Tree Display for Gene: WBGene00016331

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WBGene00016331	SMap	S_parent	Sequence	CHROMOSOME_I
	Identity	Version	2
		Name	CGC_name	obr-4	Person_evidence	WBPerson1105
			Sequence_name	C32F10.1
			Molecular_name	C32F10.1a
				C32F10.1a.1
				CE08539
				C32F10.1b
				CE32814
				C32F10.1b.1
			Other_name	CELE_C32F10.1	Accession_evidence	NDB	BX284601
			Public_name	obr-4
		DB_info	Database	AceView	gene	1G409
				WormQTL	gene	WBGene00016331
				WormFlux	gene	WBGene00016331
				NDB	locus_tag	CELE_C32F10.1
				Panther	gene	CAEEL\|WormBase=WBGene00016331\|UniProtKB=O01686
					family	PTHR10972
				NCBI	gene	172253
				RefSeq	protein	NM_001380388.1
						NM_059290.8
				TREEFAM	TREEFAM_ID	TF312807
				TrEMBL	UniProtAcc	O01686
						Q8I7N6
				UniProt_GCRP	UniProtAcc	O01686
		Species	Caenorhabditis elegans
		History	Version_change	1	28 May 2004 13:30:57	WBPerson1971	Event	Imported	Initial conversion from CDS class of stlace from WS125
				2	02 Jul 2004 16:55:45	WBPerson1971	Name_change	CGC_name	obr-4
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	obr
		Allele (66)
		Strain	WBStrain00001225
			WBStrain00001422
		RNASeq_FPKM (74)
		GO_annotation	00025286
			00025287
			00025288
			00025289
			00025290
			00025291
			00025292
			00025293
			00025294
			00121970
		Ortholog (40)
		Paralog	WBGene00008832	Caenorhabditis elegans	From_analysis	Panther
						WormBase-Compara
			WBGene00012930	Caenorhabditis elegans	From_analysis	Panther
						WormBase-Compara
			WBGene00014215	Caenorhabditis elegans	From_analysis	Panther
						WormBase-Compara
		Structured_description	Automated_description	Enables calmodulin binding activity. Predicted to be involved in sterol transport. Predicted to be located in cytosol; intracellular membrane-bounded organelle; and membrane. Expressed in tail. Is an ortholog of human OSBPL9 (oxysterol binding protein like 9).	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	C32F10.1a
			C32F10.1b
		Corresponding_transcript	C32F10.1a.1
			C32F10.1b.1
		Other_sequence	Dviv_isotig20656
			SR01474
			EW744696.1
			Hbac_isotig04606
			PSC00936_1
			SRC04090_1
			EY459419.1
			RSC04680_1
			ES672337.1
			JI211376.1
			Acan_isotig14915
			BUC01400_1
			GW409968.1
			OF00954
			FC819848.1
			Oden_isotig14786
			FK805496.1
			Dviv_isotig21638
			CJC08631_1
			ACC10590_1
			JI173007.1
			Dviv_isotig20655
			BXC03913_1
			EW743754.1
			CBC00270_1
			FC818441.1
			Oden_isotig21666
			HGC11141_1
			HGC04548_1
			HG11141
			HG07971
			OF00953
			HG04315
			OFC00400_1
			SS00566
			Dviv_isotig21639
			Dviv_isotig33391
			HGC09401_1
			RS09967
			CR02529
			FC818400.1
			SSC00908_1
			EY472862.1
			JI179707.1
			Acan_isotig10199
			OFC00021_1
			CRC01654_1
		Associated_feature	WBsf643317
			WBsf643318
			WBsf983778
			WBsf983779
			WBsf1009869
			WBsf217713
			WBsf217714
	Experimental_info	RNAi_result	WBRNAi00003572	Inferred_automatically	RNAi_primary
			WBRNAi00041696	Inferred_automatically	RNAi_primary
			WBRNAi00029429	Inferred_automatically	RNAi_primary
			WBRNAi00091934	Inferred_automatically	RNAi_primary
			WBRNAi00025373	Inferred_automatically	RNAi_primary
			WBRNAi00025375	Inferred_automatically	RNAi_primary
			WBRNAi00076187	Inferred_automatically	RNAi_primary
			WBRNAi00025374	Inferred_automatically	RNAi_primary
			WBRNAi00003063	Inferred_automatically	RNAi_primary
		Expr_pattern	Chronogram1321
			Expr5401
			Expr1014557
			Expr1036991
			Expr1145717
			Expr2014594
			Expr2032827
		Drives_construct	WBCnstr00002118
			WBCnstr00004224
			WBCnstr00028152
		Construct_product	WBCnstr00028152
		Microarray_results (30)
		Expression_cluster	WBPaper00031011:calmodulin_binding_protein
			WBPaper00031040:TGF-beta_adult_downregulated
			WBPaper00037055:DAF-16_binding_DNA
			WBPaper00037950:all-neurons_embryo_enriched
			WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
			WBPaper00037950:hypodermis_L3-L4-larva_expressed
			WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
			WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
			WBPaper00044501:gld-1_let-7_regulated
			WBPaper00044656:tatn-1(qd182)_downregulated
			WBPaper00044736:flat_dev_expression
			WBPaper00044760:germline_specific
			WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
			WBPaper00045521:Gender_Neutral
			WBPaper00045571:germline-ablation_downregulated
			WBPaper00048923:Aging_regulated
			WBPaper00048988:neuron_expressed
			WBPaper00050344:AFD-neuron_enriched
			WBPaper00050488:adult_vs_dauer_regulated_N2_20C
			WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
			WBPaper00050990:arcade_intestinal-valve_expressed
			WBPaper00050990:body-muscle_expressed
			WBPaper00050990:hypodermis_expressed
			WBPaper00050990:intestine_expressed
			WBPaper00050990:NMDA-neuron_expressed
			WBPaper00050990:seam_expressed
			WBPaper00051039:germline_enriched
			WBPaper00051245:body-wall-muscle_cytoplasm_expressed
			WBPaper00051245:cytoplasm_specific
			WBPaper00051245:epidermis_cytoplasm_expressed
			WBPaper00051245:intestine_cytoplasm_expressed
			WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
			WBPaper00052884:emb-4(hc60)_downregulated
			WBPaper00053184:sma-2(rax5)_upregulated
			WBPaper00053295:lin-22(ot269)_downregulated
			WBPaper00053302:alovudine_24h_regulated
			WBPaper00053302:stavudine_24h_regulated
			WBPaper00053302:stavudine_72h_regulated
			WBPaper00053302:zidovudine_72h_regulated
			WBPaper00055226:ADR-2_target_N2
			WBPaper00055648:germline_expressed
			WBPaper00055648:sperm_expressed
			WBPaper00055862:antimycin_damt-1(gk961032)_regulated
			WBPaper00056443:sek-1(km4)_downregulated
			WBPaper00056471:S.aureus-4h_upregulated_N2
			WBPaper00057288:Cold_downregulated_transcript
			WBPaper00058691:cfp-1(tm6369)_upregulated
			WBPaper00058691:sin-3(tm1276)_upregulated
			WBPaper00059471:EGL-43_interacting
			WBPaper00061007:S.aquatilis_downregulated
			WBPaper00061439:unc-30(ok613)_downregulated
			WBPaper00061527:lst-4_22151-F46F11.6_12556
			WBPaper00062325:etr-1(lq61)_upregulated
			WBPaper00062325:muscle_depleted_coding-RNA
			WBPaper00062354:H.zoospora_6h_regulated
			WBPaper00062669:extracellular-vesicle_protein
			WBPaper00064071:NHR-49_interacting
			WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
			WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
			WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
			WBPaper00064716:paraquat_upregulated
			WBPaper00065096:Day10_vs_Day1_upregulated
			WBPaper00065993:glp-1(e2141)_downregulated
			WBPaper00066062:xrep-4(lax137)_upregulated
			WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
			cgc4489_group_5
			cgc4489_group_11
			WBPaper00025032:cluster_81
			WBPaper00025141:N2_Expressed_Genes
			WBPaper00026929:sir-2.1_overexpression_regulated
			WBPaper00035905:FBF-1_Associated
			WBPaper00038231:Cry5B_1.5-fold_upregulated
			WBPaper00038231:Cry5B_2-fold_upregulated
			WBPaper00040184:hcf-1up_sir-2.1up_daf-2nc
			WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
			WBPaper00041606:CE_B.thuringiensis-DB27_regulated
			WBPaper00041606:CE_S.marcescens_regulated
			WBPaper00041606:CE_X.nematophila_regulated
			WBPaper00048989:N2_rapamycin_downregulated
			WBPaper00053236:Starvation_regulated_GR1307
			WBPaper00053236:Starvation_regulated_N2
			WBPaper00055899:nitroguanidine_regulated
			[cgc5767]:expression_class_M
			[cgc5767]:expression_class_MD
			[cgc5767]:expression_class_MD_pd(53_min)
			[cgc5767]:expression_class_SM
			[cgc5767]:expression_class_SMD
			[cgc6390]:herm_sex-enriched
		Interaction (33)
	Map_info	Map	I	Position	0.467236	Error	0.000888
		Positive	Positive_clone	C32F10	Inferred_automatically	From sequence, transcript, pseudogene data
		Mapping_data	Multi_point	4926
				4517
		Pseudo_map_position
	Reference	WBPaper00010145
		WBPaper00030935
		WBPaper00031011
		WBPaper00038491
		WBPaper00055090
	Remark	Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.	CGC_data_submission
	Method	Gene