WormBase Tree Display for Gene: WBGene00008832
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| WBGene00008832 | SMap | S_parent | Sequence | F14H8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | obr-2 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | F14H8.1 | ||||||||
| Molecular_name | F14H8.1a | ||||||||
| F14H8.1a.1 | |||||||||
| CE35859 | |||||||||
| F14H8.1b | |||||||||
| CE42504 | |||||||||
| F14H8.1c | |||||||||
| CE46315 | |||||||||
| F14H8.1b.1 | |||||||||
| F14H8.1c.1 | |||||||||
| Other_name | CELE_F14H8.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | obr-2 | ||||||||
| DB_info | Database | AceView | gene | 5P492 | |||||
| WormQTL | gene | WBGene00008832 | |||||||
| WormFlux | gene | WBGene00008832 | |||||||
| NDB | locus_tag | CELE_F14H8.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008832|UniProtKB=Q93485 | |||||||
| family | PTHR10972 | ||||||||
| NCBI | gene | 180003 | |||||||
| RefSeq | protein | NM_001269713.3 | |||||||
| NM_074294.5 | |||||||||
| NM_001129445.5 | |||||||||
| TrEMBL | UniProtAcc | B2D6P3 | |||||||
| G1K0Y0 | |||||||||
| Q93485 | |||||||||
| UniProt_GCRP | UniProtAcc | Q93485 | |||||||
| OMIM | gene | 606731 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | obr-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | obr | ||||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005827 | ||||||||
| 00005828 | |||||||||
| 00005829 | |||||||||
| 00005830 | |||||||||
| 00005831 | |||||||||
| 00005832 | |||||||||
| 00005833 | |||||||||
| 00005834 | |||||||||
| 00116678 | |||||||||
| Contained_in_operon | CEOP5436 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00016331 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00014215 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012930 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable sterol binding activity and sterol transporter activity. Predicted to be involved in sterol transport. Predicted to be located in cytosol; perinuclear endoplasmic reticulum; and plasma membrane. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 67. Is an ortholog of human OSBPL2 (oxysterol binding protein like 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110588 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15761) | ||||
| Molecular_info | Corresponding_CDS | F14H8.1a | |||||||
| F14H8.1b | |||||||||
| F14H8.1c | |||||||||
| Corresponding_CDS_history | F14H8.1:wp111 | ||||||||
| Corresponding_transcript | F14H8.1a.1 | ||||||||
| F14H8.1b.1 | |||||||||
| F14H8.1c.1 | |||||||||
| Other_sequence | JI166695.1 | ||||||||
| BUC02044_1 | |||||||||
| JO473702.1 | |||||||||
| JI178404.1 | |||||||||
| CJC17892_1 | |||||||||
| Associated_feature | WBsf717282 | ||||||||
| WBsf718455 | |||||||||
| WBsf718456 | |||||||||
| WBsf1020962 | |||||||||
| WBsf235016 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00091954 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00023422 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002181 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023711 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023199 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023999 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030972 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044661 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013328 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026580 | ||||||||
| Expr1033851 | |||||||||
| Expr1148634 | |||||||||
| Expr2014592 | |||||||||
| Expr2032825 | |||||||||
| Drives_construct | WBCnstr00032649 | ||||||||
| Construct_product | WBCnstr00032649 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (148) | |||||||||
| Interaction | WBInteraction000036699 | ||||||||
| WBInteraction000043519 | |||||||||
| WBInteraction000360775 | |||||||||
| WBInteraction000376388 | |||||||||
| WBInteraction000399470 | |||||||||
| WBInteraction000406894 | |||||||||
| WBInteraction000425665 | |||||||||
| WBInteraction000447238 | |||||||||
| Map_info | Map | V | Position | 7.16225 | Error | 0.005018 | |||
| Positive | Positive_clone | F14H8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010008 | ||||||||
| WBPaper00010145 | |||||||||
| WBPaper00025402 | |||||||||
| WBPaper00030935 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062625 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
