WormBase Tree Display for Gene: WBGene00016331
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| WBGene00016331 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | obr-4 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | C32F10.1 | ||||||||
| Molecular_name | C32F10.1a | ||||||||
| C32F10.1a.1 | |||||||||
| CE08539 | |||||||||
| C32F10.1b | |||||||||
| CE32814 | |||||||||
| C32F10.1b.1 | |||||||||
| Other_name | CELE_C32F10.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | obr-4 | ||||||||
| DB_info | Database | AceView | gene | 1G409 | |||||
| WormQTL | gene | WBGene00016331 | |||||||
| WormFlux | gene | WBGene00016331 | |||||||
| NDB | locus_tag | CELE_C32F10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016331|UniProtKB=O01686 | |||||||
| family | PTHR10972 | ||||||||
| NCBI | gene | 172253 | |||||||
| RefSeq | protein | NM_001380388.1 | |||||||
| NM_059290.8 | |||||||||
| TREEFAM | TREEFAM_ID | TF312807 | |||||||
| TrEMBL | UniProtAcc | O01686 | |||||||
| Q8I7N6 | |||||||||
| UniProt_GCRP | UniProtAcc | O01686 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Jul 2004 16:55:45 | WBPerson1971 | Name_change | CGC_name | obr-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | obr | ||||||||
| Allele (66) | |||||||||
| Strain | WBStrain00001225 | ||||||||
| WBStrain00001422 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00025286 | ||||||||
| 00025287 | |||||||||
| 00025288 | |||||||||
| 00025289 | |||||||||
| 00025290 | |||||||||
| 00025291 | |||||||||
| 00025292 | |||||||||
| 00025293 | |||||||||
| 00025294 | |||||||||
| 00121970 | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00008832 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012930 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00014215 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables calmodulin binding activity. Predicted to be involved in sterol transport. Predicted to be located in cytosol; intracellular membrane-bounded organelle; and membrane. Expressed in tail. Is an ortholog of human OSBPL9 (oxysterol binding protein like 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C32F10.1a | |||||||
| C32F10.1b | |||||||||
| Corresponding_transcript | C32F10.1a.1 | ||||||||
| C32F10.1b.1 | |||||||||
| Other_sequence (47) | |||||||||
| Associated_feature | WBsf643317 | ||||||||
| WBsf643318 | |||||||||
| WBsf983778 | |||||||||
| WBsf983779 | |||||||||
| WBsf1009869 | |||||||||
| WBsf217713 | |||||||||
| WBsf217714 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003572 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041696 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029429 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091934 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025373 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025375 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076187 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025374 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003063 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1321 | ||||||||
| Expr5401 | |||||||||
| Expr1014557 | |||||||||
| Expr1036991 | |||||||||
| Expr1145717 | |||||||||
| Expr2014594 | |||||||||
| Expr2032827 | |||||||||
| Drives_construct | WBCnstr00002118 | ||||||||
| WBCnstr00004224 | |||||||||
| WBCnstr00028152 | |||||||||
| Construct_product | WBCnstr00028152 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | I | Position | 0.467236 | Error | 0.000888 | |||
| Positive | Positive_clone | C32F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4926 | |||||||
| 4517 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010145 | ||||||||
| WBPaper00030935 | |||||||||
| WBPaper00031011 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
