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WormBase Tree Display for Gene: WBGene00001051

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Name Class

WBGene00001051SMapS_parentSequenceC09G4
IdentityVersion2
NameCGC_namecks-1Person_evidenceWBPerson632
Sequence_nameC09G4.3
Molecular_nameC09G4.3
C09G4.3.1
CE03980
Other_namedom-6Person_evidenceWBPerson632
CELE_C09G4.3Accession_evidenceNDBBX284604
Public_namecks-1
DB_infoDatabaseAceViewgene4J279
WormQTLgeneWBGene00001051
WormFluxgeneWBGene00001051
NDBlocus_tagCELE_C09G4.3
PanthergeneCAEEL|WormBase=WBGene00001051|UniProtKB=Q17868
familyPTHR23415
NCBIgene177658
RefSeqproteinNM_001392353.1
SwissProtUniProtAccQ17868
TREEFAMTREEFAM_IDTF101142
UniProt_GCRPUniProtAccQ17868
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:22WBPerson1971EventImportedInitial conversion from geneace
217 Aug 2007 16:08:43WBPerson2970Name_changeCGC_namecks-1 transferred from Other_name to CGC_name
Other_namedom-1 transferred from CGC_name to Other_name
StatusLive
Gene_info (11)
Molecular_infoCorresponding_CDSC09G4.3
Corresponding_transcriptC09G4.3.1
Other_sequence (56)
Associated_featureWBsf646169
WBsf228695
WBsf228696
Experimental_infoRNAi_resultWBRNAi00090760Inferred_automaticallyRNAi_primary
WBRNAi00040228Inferred_automaticallyRNAi_primary
WBRNAi00008376Inferred_automaticallyRNAi_primary
WBRNAi00024513Inferred_automaticallyRNAi_primary
WBRNAi00027773Inferred_automaticallyRNAi_primary
WBRNAi00103179Inferred_automaticallyRNAi_primary
WBRNAi00076107Inferred_automaticallyRNAi_primary
WBRNAi00077318Inferred_automaticallyRNAi_primary
Expr_patternExpr1027516
Expr1030663
Expr1144301
Expr2010036
Expr2028277
Drives_constructWBCnstr00037119
Construct_productWBCnstr00037119
Microarray_resultsSMD_C09G4.3
174070_at
193886_at
A_12_P105843
Aff_C09G4.3
GPL13394_WBGene00001051
GPL13914_C09G4.3
GPL14144_C09G4.3_200-259_0.959_1_A
GPL14144_C09G4.3_23-82_0.940_7_B
GPL14144_C09G4.3_57-116_0.938_9_C
GPL19516_CGZ0003862
GPL21109_C09G4.3
GPL3518_CE03980
GPL8304_CE_WBGene00001051_A
GPL8304_CE_WBGene00001051_B
GPL8673_C09G4_3P00110
GPL8673_C09G4_3P00124
GPL8673_C09G4_3P00148
GPL9450_C09G4.3
cea2.c.26301
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032097:CGH-1-associated-mRNA
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_adult_enriched
WBPaper00037950:CEP-sheath-cells_adult_SelectivelyEnriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00046509:htz-1(ok3099)_upregulated
WBPaper00046509:lin-35(n745)_upregulated
WBPaper00046795:starvation_downregulated
WBPaper00048762:FOG-3_associated
WBPaper00048923:Aging_regulated
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050193:cec-4(ok3124)_downregulated_L1
WBPaper00050193:met-2(n4256)set-25(n5021)_downregulated_L1
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050686:glp-1(e2141)_downregulated
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056284:ints-5(RNAi)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:SGP_biased
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057288:Cold_upregulated_transcript
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059027:neuron-synapses_enriched
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059763:neuron_expressed
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061274:hypergravity_10xg_upregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061340:ADA_ADE_grandparent
WBPaper00061340:ASE_parent
WBPaper00061340:ASK_parent
WBPaper00061340:Ciliated_amphid_neuron
WBPaper00061340:Ciliated_non_amphid_neuron
WBPaper00061340:g1A_parent
WBPaper00061340:I2_grandparent
WBPaper00061340:Neuroblast_AIZ_FLP
WBPaper00061340:Neuroblast_ALM_BDU
WBPaper00061340:Neuroblast_ASE_ASJ_AUA
WBPaper00061340:Neuroblast_BAG_SMDVx
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061340:Neuroblast_IL1_IL2
WBPaper00061340:OLL_parent
WBPaper00061340:OLQ_grandparent
WBPaper00061340:Parents_of_U_F_B_DVA
WBPaper00061340:Parent_of_AMsh_URB
WBPaper00061340:Parent_of_exc_gland_AVK
WBPaper00061340:PLM_ALN_great_grandparent
WBPaper00061340:RIA_parent
WBPaper00061340:RIC_parent
WBPaper00061527:cyy-1_3136-hcf-1_2478
WBPaper00061527:pcn-1-cyb-3_17196
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_6_2
cgc4489_group_2
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00034739:N2lessDR1350
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00037611:RNP-8-associated
WBPaper00037695:LD_3-day
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00039866:ClassComp_daf-19_upregulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040963:TA300_down
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
WBPaper00056330:mrps-5(RNAi)_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (146)
Map_infoMapIVPosition3.88909Error0.003703
PositivePositive_cloneC09G4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4267
4430
Pseudo_map_position
Reference (17)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene