WormBase Tree Display for Gene: WBGene00013237

WBGene00013237 SMap: S_parent: Sequence: Y56A3A
  Identity: Version: 3
    Name: CGC_name: ndab-1 Person_evidence: WBPerson25803
            WBPerson545
            WBPerson555
      Sequence_name: Y56A3A.19
      Molecular_name: Y56A3A.19
        Y56A3A.19.1
        CE22587
      Other_name: CELE_Y56A3A.19 Accession_evidence: NDB BX284603
      Public_name: ndab-1
    DB_info: Database: AceView gene 3N4
        WormQTL gene WBGene00013237
        WormFlux gene WBGene00013237
        NDB locus_tag CELE_Y56A3A.19
        Panther gene CAEEL|WormBase=WBGene00013237|UniProtKB=Q9U241
          family PTHR20863
        NCBI gene 176622
        RefSeq protein NM_067148.6
        TREEFAM TREEFAM_ID TF314361
        TrEMBL UniProtAcc Q9U241
        UniProt_GCRP UniProtAcc Q9U241
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Jan 2023 20:48:33 WBPerson51134 Name_change: CGC_name: ndab-1
        3 16 Jan 2023 18:37:21 WBPerson51134 Name_change: CGC_name: ndab-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ndab
    Allele (26)
    Strain: WBStrain00001895
    RNASeq_FPKM (74)
    GO_annotation: 00098709
      00098710
      00098711
      00098712
      00098713
      00120138
    Contained_in_operon: CEOP3738
    Ortholog (34)
    Paralog: WBGene00018151 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013236 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable acyl binding activity and acyl carrier activity. Predicted to be involved in fatty acid biosynthetic process. Predicted to be located in mitochondrion. Predicted to be part of mitochondrial respiratory chain complex I. Is an ortholog of human NDUFAB1 (NADH:ubiquinone oxidoreductase subunit AB1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y56A3A.19
    Corresponding_transcript: Y56A3A.19.1
    Other_sequence (48)
    Associated_feature: WBsf651525
      WBsf227612
      WBsf227613
  Experimental_info: RNAi_result (14)
    Expr_pattern: Chronogram350
      Expr7069
      Expr1010331
      Expr1035895
      Expr1161006
      Expr2007999
      Expr2026240
    Drives_construct: WBCnstr00002686
    Microarray_results (23)
    Expression_cluster: WBPaper00027339:daf-12(rh273)_downregulated
      WBPaper00028451:Low_abundance_spermatogenesis_enriched
      WBPaper00032425:up_in_rde-4
      WBPaper00032528:L3_enriched
      WBPaper00035073:mitochondria_protein
      WBPaper00037086:biotin_regulated
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038118:aak-2(gt33)_downregulated
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00046217:mev-1(kn1)_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:dld-1-skn-1_16701
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064201:SNA-3_interacting
      WBPaper00065158:AFD_depleted
      cgc4386_cluster_3_5
      cgc4489_group_3
      WBPaper00025032:cluster_8
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:FedUp
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_G
      WBPaper00036375:depleted_in_PVD_OLL
      WBPaper00037113:Diazinon_16C_regulated
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042128:gei-8(ok1671)_downregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:cluster_6
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
    Interaction: WBInteraction000042230
      WBInteraction000104301
      WBInteraction000104613
      WBInteraction000104632
      WBInteraction000104868
      WBInteraction000105240
      WBInteraction000105899
      WBInteraction000108917
      WBInteraction000108964
      WBInteraction000110636
      WBInteraction000111670
      WBInteraction000111678
      WBInteraction000111684
      WBInteraction000111689
      WBInteraction000111690
      WBInteraction000111691
      WBInteraction000111702
      WBInteraction000111712
      WBInteraction000111721
      WBInteraction000111773
      WBInteraction000112209
      WBInteraction000112606
      WBInteraction000115714
      WBInteraction000115763
      WBInteraction000115795
      WBInteraction000118027
      WBInteraction000118177
      WBInteraction000125342
      WBInteraction000133882
      WBInteraction000135250
      WBInteraction000136644
      WBInteraction000140182
      WBInteraction000142079
      WBInteraction000144470
      WBInteraction000146021
      WBInteraction000146417
      WBInteraction000149567
      WBInteraction000149574
      WBInteraction000150366
      WBInteraction000153136
      WBInteraction000153355
      WBInteraction000153385
      WBInteraction000153410
      WBInteraction000153440
      WBInteraction000153476
      WBInteraction000153503
      WBInteraction000153617
      WBInteraction000153662
      WBInteraction000154087
      WBInteraction000154178
      WBInteraction000155251
      WBInteraction000155511
      WBInteraction000155539
      WBInteraction000155603
      WBInteraction000155666
      WBInteraction000155698
      WBInteraction000155738
      WBInteraction000155792
      WBInteraction000155793
      WBInteraction000155794
      WBInteraction000155795
      WBInteraction000155834
      WBInteraction000155974
      WBInteraction000156156
      WBInteraction000156307
      WBInteraction000156372
      WBInteraction000156390
      WBInteraction000156422
      WBInteraction000156436
      WBInteraction000156455
      WBInteraction000157396
      WBInteraction000157416
      WBInteraction000157432
      WBInteraction000157446
      WBInteraction000157472
      WBInteraction000157484
      WBInteraction000157504
      WBInteraction000157514
      WBInteraction000157560
      WBInteraction000157571
      WBInteraction000157579
      WBInteraction000157588
      WBInteraction000157595
      WBInteraction000157601
      WBInteraction000161105
      WBInteraction000161106
      WBInteraction000161107
      WBInteraction000164337
      WBInteraction000166543
      WBInteraction000172501
      WBInteraction000175219
      WBInteraction000176532
      WBInteraction000177736
      WBInteraction000180049
      WBInteraction000182721
      WBInteraction000183338
      WBInteraction000184388
      WBInteraction000186190
      WBInteraction000188048
      WBInteraction000189034
      WBInteraction000190847
      WBInteraction000194809
      WBInteraction000198129
      WBInteraction000200358
      WBInteraction000200710
      WBInteraction000201796
      WBInteraction000203612
      WBInteraction000205622
      WBInteraction000210029
      WBInteraction000210738
      WBInteraction000212721
      WBInteraction000213748
      WBInteraction000214249
      WBInteraction000214287
      WBInteraction000216745
      WBInteraction000217769
      WBInteraction000220782
      WBInteraction000221285
      WBInteraction000224294
      WBInteraction000224371
      WBInteraction000229067
      WBInteraction000236755
      WBInteraction000240645
      WBInteraction000240697
      WBInteraction000251376
      WBInteraction000251695
      WBInteraction000254479
      WBInteraction000255026
      WBInteraction000255384
      WBInteraction000255683
      WBInteraction000268908
      WBInteraction000270118
      WBInteraction000270535
      WBInteraction000271175
      WBInteraction000271208
      WBInteraction000273019
      WBInteraction000276233
      WBInteraction000279245
      WBInteraction000282415
      WBInteraction000284013
      WBInteraction000285382
      WBInteraction000286548
      WBInteraction000288457
      WBInteraction000289951
      WBInteraction000292972
      WBInteraction000296482
      WBInteraction000304550
      WBInteraction000309070
      WBInteraction000310472
      WBInteraction000314696
      WBInteraction000318228
      WBInteraction000323051
      WBInteraction000326439
      WBInteraction000332156
      WBInteraction000332215
      WBInteraction000335988
      WBInteraction000341074
      WBInteraction000341101
      WBInteraction000341111
      WBInteraction000341134
      WBInteraction000341135
      WBInteraction000341223
      WBInteraction000341303
      WBInteraction000341343
      WBInteraction000341351
      WBInteraction000344888
      WBInteraction000346177
      WBInteraction000352593
      WBInteraction000353866
      WBInteraction000373989
      WBInteraction000374404
      WBInteraction000377000
      WBInteraction000379644
      WBInteraction000379860
      WBInteraction000381342
      WBInteraction000394494
      WBInteraction000401259
      WBInteraction000401613
      WBInteraction000407972
      WBInteraction000408620
      WBInteraction000410334
      WBInteraction000415121
      WBInteraction000416771
      WBInteraction000417328
      WBInteraction000419285
      WBInteraction000428865
      WBInteraction000430167
      WBInteraction000435372
      WBInteraction000442904
      WBInteraction000444898
      WBInteraction000445066
      WBInteraction000445312
      WBInteraction000445893
      WBInteraction000451994
      WBInteraction000453020
      WBInteraction000456820
      WBInteraction000457390
      WBInteraction000457677
      WBInteraction000462202
      WBInteraction000462811
      WBInteraction000463304
      WBInteraction000463305
      WBInteraction000463386
      WBInteraction000464408
      WBInteraction000464432
      WBInteraction000465516
      WBInteraction000466365
      WBInteraction000466403
      WBInteraction000467527
      WBInteraction000468215
      WBInteraction000468854
      WBInteraction000468884
      WBInteraction000468929
      WBInteraction000469883
      WBInteraction000471246
      WBInteraction000471748
      WBInteraction000471828
      WBInteraction000473695
      WBInteraction000474114
      WBInteraction000474449
      WBInteraction000475080
      WBInteraction000517961
      WBInteraction000554220
      WBInteraction000577982
  Map_info: Positive: Positive_clone: Y56A3A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 13.3792
  Reference: WBPaper00029254
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
  Method: Gene