WormBase Tree Display for Gene: WBGene00011464

WBGene00011464 SMap: S_parent: Sequence: T05B9
  Identity: Version: 1
    Name: Sequence_name: T05B9.1
      Molecular_name: T05B9.1
        T05B9.1.1
        CE02310
      Other_name: CELE_T05B9.1 Accession_evidence: NDB BX284602
      Public_name: T05B9.1
    DB_info: Database: AceView gene 2L548
        WormQTL gene WBGene00011464
        WormFlux gene WBGene00011464
        NDB locus_tag CELE_T05B9.1
        NCBI gene 174718
        RefSeq protein NM_064008.4
        TrEMBL UniProtAcc Q22215
        UniProt_GCRP UniProtAcc Q22215
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    Ortholog: chrII_pilon.g5907 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00045062 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
    Structured_description: Automated_description: Enriched in several structures, including germ line; germline precursor cell; head mesodermal cell; neurons; and pharyngeal muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; hsf-1; and gld-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by ten chemicals including manganese chloride; Zidovudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05B9.1
    Corresponding_transcript: T05B9.1.1
    Associated_feature: WBsf650558
      WBsf650559
      WBsf989683
      WBsf989684
      WBsf223913
  Experimental_info: RNAi_result: WBRNAi00008091 Inferred_automatically: RNAi_primary
      WBRNAi00052479 Inferred_automatically: RNAi_primary
      WBRNAi00018212 Inferred_automatically: RNAi_primary
      WBRNAi00035184 Inferred_automatically: RNAi_primary
      WBRNAi00103505 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013989
      Expr1035044
      Expr1156104
      Expr2005861
      Expr2024078
    Drives_construct: WBCnstr00030635
    Construct_product: WBCnstr00030635
    Microarray_results (15)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032097:CGH-1-associated-mRNA
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:germline-precursors_embryo_enriched
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(gk119)_downregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
      WBPaper00045050:drh-3 (ne4253)_downregulated
      WBPaper00045417:128Q-huntingtin_upreglated
      WBPaper00045521:Oogenic
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00048611:MnCl2_downregulated
      WBPaper00048762:FOG-1_associated
      WBPaper00048762:FOG-3_associated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050193:lsm-1(tm3585)_upregulated_L3
      WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00054191:H3.3(null)_L1_upregulated
      WBPaper00054792:FOG-3_interacting
      WBPaper00055103:thoc-5(wy822)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056284:ints-5(RNAi)_downregulated
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00057041:spc-1(cas971)_upregulated
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057154:HeatShock_downregulated_mRNA
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058598:mex-1(or286)_downregulated
      WBPaper00058598:mex-3(eu149)_downregulated
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00059174:MEG-3_interacting
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_L1
      WBPaper00059739:hira-1(gk835598)_upregulated_L4
      WBPaper00059895:wounding_downregulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060871:M.humicola-infection_12h_regulated
      WBPaper00060886:met-2(n4256)_upregulated
      WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
      WBPaper00060886:spr-5(by101)_upregulated
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00061274:hypergravity_10xg_upregulated
      WBPaper00061274:hypergravity_15xg_upregulated
      WBPaper00061340:Germline
      WBPaper00061340:RIC
      WBPaper00061527:T22D1.5-inx-14
      WBPaper00062056:lin-37(n758)_downregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064107:lin-35(n745)_downregulated
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
      WBPaper00064403:Heat-killed-E.Coli_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065258:anchor-cell_depleted
      WBPaper00065841:3_0
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_2
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00025032:cluster_3
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_A_Class
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00034739:RIL17moreRIL14
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_F
      WBPaper00037147:heatshock_upregulated
      WBPaper00037695:LD_3-day
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
      WBPaper00040963:TA300_down
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048624:hlh-25(ok1710)_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00051387:Triclosan_downregulated
      [cgc5767]:cluster_3
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(66_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:Cluster_E
      [cgc6390]:oogenesis-enriched
    Interaction: WBInteraction000109551
      WBInteraction000109748
      WBInteraction000115055
      WBInteraction000119127
      WBInteraction000119524
      WBInteraction000124678
      WBInteraction000135988
      WBInteraction000136766
      WBInteraction000137368
      WBInteraction000139539
      WBInteraction000141096
      WBInteraction000144773
      WBInteraction000145905
      WBInteraction000146311
      WBInteraction000146761
      WBInteraction000152266
      WBInteraction000156649
      WBInteraction000156823
      WBInteraction000157007
      WBInteraction000157130
      WBInteraction000159721
      WBInteraction000160080
      WBInteraction000163849
      WBInteraction000170785
      WBInteraction000171101
      WBInteraction000172682
      WBInteraction000175654
      WBInteraction000177847
      WBInteraction000179652
      WBInteraction000179932
      WBInteraction000180923
      WBInteraction000182781
      WBInteraction000185023
      WBInteraction000188381
      WBInteraction000189405
      WBInteraction000189660
      WBInteraction000191552
      WBInteraction000195129
      WBInteraction000195863
      WBInteraction000196956
      WBInteraction000199284
      WBInteraction000200018
      WBInteraction000200670
      WBInteraction000200858
      WBInteraction000201437
      WBInteraction000202462
      WBInteraction000203151
      WBInteraction000203851
      WBInteraction000206676
      WBInteraction000206718
      WBInteraction000206821
      WBInteraction000207032
      WBInteraction000210150
      WBInteraction000213018
      WBInteraction000214324
      WBInteraction000215399
      WBInteraction000215421
      WBInteraction000215527
      WBInteraction000215766
      WBInteraction000218780
      WBInteraction000219183
      WBInteraction000219207
      WBInteraction000219566
      WBInteraction000221227
      WBInteraction000221415
      WBInteraction000222117
      WBInteraction000222755
      WBInteraction000224414
      WBInteraction000225369
      WBInteraction000226013
      WBInteraction000226747
      WBInteraction000227282
      WBInteraction000229939
      WBInteraction000230368
      WBInteraction000230769
      WBInteraction000231007
      WBInteraction000231716
      WBInteraction000232857
      WBInteraction000233516
      WBInteraction000235608
      WBInteraction000235698
      WBInteraction000235822
      WBInteraction000236517
      WBInteraction000237126
      WBInteraction000237295
      WBInteraction000238066
      WBInteraction000238429
      WBInteraction000238636
      WBInteraction000244839
      WBInteraction000245605
      WBInteraction000247831
      WBInteraction000251595
      WBInteraction000252004
      WBInteraction000252506
      WBInteraction000254107
      WBInteraction000255564
      WBInteraction000257088
      WBInteraction000257880
      WBInteraction000259149
      WBInteraction000260091
      WBInteraction000260234
      WBInteraction000262610
      WBInteraction000265296
      WBInteraction000265761
      WBInteraction000266817
      WBInteraction000267214
      WBInteraction000267401
      WBInteraction000268798
      WBInteraction000268949
      WBInteraction000270170
      WBInteraction000270786
      WBInteraction000271075
      WBInteraction000271802
      WBInteraction000272526
      WBInteraction000273609
      WBInteraction000274933
      WBInteraction000276347
      WBInteraction000277508
      WBInteraction000278351
      WBInteraction000279899
      WBInteraction000281138
      WBInteraction000285253
      WBInteraction000285871
      WBInteraction000288791
      WBInteraction000289316
      WBInteraction000289353
      WBInteraction000289440
      WBInteraction000291238
      WBInteraction000291406
      WBInteraction000291475
      WBInteraction000291901
      WBInteraction000292673
      WBInteraction000298576
      WBInteraction000300473
      WBInteraction000302900
      WBInteraction000304153
      WBInteraction000307293
      WBInteraction000309482
      WBInteraction000310050
      WBInteraction000311556
      WBInteraction000312815
      WBInteraction000314454
      WBInteraction000315888
      WBInteraction000317101
      WBInteraction000317104
      WBInteraction000317359
      WBInteraction000318004
      WBInteraction000318084
      WBInteraction000320927
      WBInteraction000321192
      WBInteraction000323547
      WBInteraction000324252
      WBInteraction000324705
      WBInteraction000325731
      WBInteraction000325953
      WBInteraction000326281
      WBInteraction000326732
      WBInteraction000332847
      WBInteraction000334787
      WBInteraction000335841
      WBInteraction000337392
      WBInteraction000337520
      WBInteraction000338098
      WBInteraction000339007
      WBInteraction000339940
      WBInteraction000340292
      WBInteraction000341647
      WBInteraction000341739
      WBInteraction000343730
      WBInteraction000344042
      WBInteraction000345417
      WBInteraction000346154
      WBInteraction000346178
      WBInteraction000346857
      WBInteraction000347094
      WBInteraction000347541
      WBInteraction000349884
      WBInteraction000352092
      WBInteraction000352977
      WBInteraction000353748
      WBInteraction000354147
      WBInteraction000354603
      WBInteraction000355229
      WBInteraction000357963
      WBInteraction000358065
      WBInteraction000360596
      WBInteraction000362603
      WBInteraction000365428
      WBInteraction000366008
      WBInteraction000368725
      WBInteraction000370660
      WBInteraction000373155
      WBInteraction000376148
      WBInteraction000377938
      WBInteraction000379171
      WBInteraction000381554
      WBInteraction000381695
      WBInteraction000382758
      WBInteraction000384028
      WBInteraction000387167
      WBInteraction000390538
      WBInteraction000391082
      WBInteraction000392620
      WBInteraction000395339
      WBInteraction000399418
      WBInteraction000399560
      WBInteraction000400156
      WBInteraction000400332
      WBInteraction000401806
      WBInteraction000401821
      WBInteraction000402484
      WBInteraction000405550
      WBInteraction000409257
      WBInteraction000412243
      WBInteraction000418077
      WBInteraction000419831
      WBInteraction000420543
      WBInteraction000421127
      WBInteraction000421981
      WBInteraction000422591
      WBInteraction000426138
      WBInteraction000429053
      WBInteraction000432435
      WBInteraction000434771
      WBInteraction000436638
      WBInteraction000436843
      WBInteraction000437657
      WBInteraction000437815
      WBInteraction000445710
      WBInteraction000449300
      WBInteraction000449551
      WBInteraction000451423
      WBInteraction000451639
      WBInteraction000452323
      WBInteraction000454313
      WBInteraction000459749
      WBInteraction000459977
      WBInteraction000461072
      WBInteraction000462052
      WBInteraction000462372
      WBInteraction000522180
      WBInteraction000580759
  Map_info: Positive: Positive_clone: T05B9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 3.38679
  Reference: WBPaper00060886
  Method: Gene