WormBase Tree Display for Gene: WBGene00018547
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WBGene00018547 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (471) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00068361 | ||||||
00068362 | |||||||
00068363 | |||||||
00068364 | |||||||
00123673 | |||||||
Ortholog (38) | |||||||
Paralog | WBGene00000792 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00008194 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00012134 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00013118 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00018607 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity and serine-type peptidase activity. Involved in defense response to Gram-positive bacterium. Predicted to be located in extracellular region and membrane. Expressed in pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F47C12.2 | |||||
Corresponding_CDS_history | F47C12.2:wp239 | ||||||
Corresponding_transcript | F47C12.2.1 | ||||||
Other_sequence (13) | |||||||
Associated_feature | WBsf645898 | ||||||
WBsf660056 | |||||||
WBsf660057 | |||||||
WBsf660058 | |||||||
WBsf660059 | |||||||
WBsf660060 | |||||||
WBsf660061 | |||||||
WBsf718068 | |||||||
WBsf996132 | |||||||
WBsf996133 | |||||||
WBsf996134 | |||||||
WBsf996135 | |||||||
WBsf996136 | |||||||
WBsf996137 | |||||||
WBsf996138 | |||||||
WBsf996139 | |||||||
WBsf996140 | |||||||
WBsf996141 | |||||||
WBsf1017160 | |||||||
WBsf1017161 | |||||||
WBsf1017162 | |||||||
WBsf1017163 | |||||||
WBsf1017164 | |||||||
WBsf1017165 | |||||||
WBsf1017166 | |||||||
Experimental_info | RNAi_result | WBRNAi00047636 | Inferred_automatically | RNAi_primary | |||
WBRNAi00068009 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015176 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047634 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078255 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115912 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019500 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015174 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054579 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr168 | ||||||
Expr1013413 | |||||||
Expr1019347 | |||||||
Expr1037987 | |||||||
Expr1037988 | |||||||
Expr1151475 | |||||||
Expr1151478 | |||||||
Expr2010209 | |||||||
Expr2028450 | |||||||
Microarray_results (49) | |||||||
Expression_cluster (216) | |||||||
Interaction | WBInteraction000007463 | ||||||
WBInteraction000200061 | |||||||
WBInteraction000223260 | |||||||
WBInteraction000233937 | |||||||
WBInteraction000251575 | |||||||
WBInteraction000282448 | |||||||
WBInteraction000299342 | |||||||
WBInteraction000390775 | |||||||
WBInteraction000434433 | |||||||
WBInteraction000573860 | |||||||
Map_info | Map | IV | Position | -1.0599 | Error | 0.01717 | |
Positive | Positive_clone | F47C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00065560 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |