WormBase Tree Display for CDS: F47C12.2
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| F47C12.2 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_IV | ||
| Structure | Source_exons (26) | ||||
| DB_info | Database | TrEMBL | UniProtAcc | Q20531 | |
| UniProt | UniProtAcc | Q20531 | |||
| UniProt_GCRP | UniProtAcc | Q20531 | |||
| AlphaFold | entry | Q20531 | |||
| NCBI_protein | GI_number | GI:548932277 | |||
| Protein_id | CHROMOSOME_IV | CCD71377 | 2 | ||
| DB_remark | CLEC-78 protein; contains similarity to Pfam domains PF00008 (EGF-like domain), PF00057 (Low-density lipoprotein receptor domain class A), PF00084 (Sushi repeat (SCR repeat)), PF00431 (CUB domain), PF02494 (HYR domain), PF07645 (Calcium-binding EGF domain), PF07699 (Tyrosine-protein kinase ephrin type A/B receptor-like), PF12661 (Human growth factor-like EGF); contains similarity to Interpro domains IPR036055 (LDL receptor-like superfamily), IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily), IPR000436 (Sushi/SCR/CCP domain), IPR008979 (Galactose-binding-like domain superfamily), IPR002172 (Low-density lipoprotein (LDL) receptor class A repeat), IPR000859 (CUB domain), IPR011641 (Tyrosine-protein kinase ephrin type A/B receptor-like), IPR001881 (EGF-like calcium-binding domain), IPR009030 (Growth factor receptor cysteine-rich domain superfamily), IPR016186 (C-type lectin-like/link domain superfamily), IPR001304 (C-type lectin-like), IPR000421 (Coagulation factor 5/8 C-terminal domain), IPR035976 (Sushi/SCR/CCP superfamily), IPR000742 (EGF-like domain), IPR003410 (HYR domain), IPR035914 (Spermadhesin, CUB domain superfamily), IPR049883 (NOTCH1 EGF-like calcium-binding domain), IPR016187 (C-type lectin fold), IPR013032 (EGF-like, conserved site) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible (11) | |||||
| Method | curated |
