WormBase Tree Display for Gene: WBGene00008194
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| WBGene00008194 | SMap | S_parent | Sequence | C49C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C49C3.4 | |||||||
| Molecular_name | C49C3.4a | ||||||||
| C49C3.4a.1 | |||||||||
| CE19743 | |||||||||
| C49C3.4b | |||||||||
| CE48513 | |||||||||
| C49C3.4c | |||||||||
| CE50538 | |||||||||
| C49C3.4b.1 | |||||||||
| C49C3.4c.1 | |||||||||
| Other_name | CELE_C49C3.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C49C3.4 | ||||||||
| DB_info | Database | AceView | gene | 4S271 | |||||
| WormQTL | gene | WBGene00008194 | |||||||
| WormFlux | gene | WBGene00008194 | |||||||
| NDB | locus_tag | CELE_C49C3.4 | |||||||
| NCBI | gene | 178513 | |||||||
| RefSeq | protein | NM_001313021.3 | |||||||
| NM_001380571.1 | |||||||||
| NM_070679.6 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3ARI2 | |||||||
| U4PBX8 | |||||||||
| Q9XUF9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XUF9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (344) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog | WBGene00012134 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00000792 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013118 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018547 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018607 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in AFD; AINL; AINR; head mesodermal cell; and intestine based on SAGE; tiling array; RNA-seq; single-cell RNA-seq; and proteomic studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on proteomic; RNA-seq; and microarray studies. Is affected by sixteen chemicals including mianserin; nicotine; and Zidovudine based on RNA-seq; proteomic; and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49C3.4a | |||||||
| C49C3.4b | |||||||||
| C49C3.4c | |||||||||
| Corresponding_transcript | C49C3.4a.1 | ||||||||
| C49C3.4b.1 | |||||||||
| C49C3.4c.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf646608 | ||||||||
| WBsf999023 | |||||||||
| WBsf999024 | |||||||||
| WBsf1018979 | |||||||||
| WBsf229627 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042782 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012125 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028576 | ||||||||
| Expr1033558 | |||||||||
| Expr1146766 | |||||||||
| Expr2001765 | |||||||||
| Expr2019993 | |||||||||
| Drives_construct | WBCnstr00033168 | ||||||||
| Construct_product | WBCnstr00033168 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (193) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | C49C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 16.485 | |||||||
| Reference | WBPaper00041771 | ||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
