WormBase Tree Display for Gene: WBGene00007969
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WBGene00007969 | SMap | S_parent | Sequence | C36A4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | acs-19 | Person_evidence | WBPerson237 | |||||
WBPerson2239 | |||||||||
Sequence_name | C36A4.9 | ||||||||
Molecular_name | C36A4.9a | ||||||||
C36A4.9a.1 | |||||||||
CE03076 | |||||||||
C36A4.9b | |||||||||
CE37209 | |||||||||
C36A4.9b.1 | |||||||||
Other_name | CELE_C36A4.9 | Accession_evidence | NDB | BX284603 | |||||
Public_name | acs-19 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 11 Sep 2008 09:57:25 | WBPerson2970 | Name_change | CGC_name | acs-19 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acs | ||||||||
Allele (29) | |||||||||
Strain | WBStrain00001428 | ||||||||
WBStrain00001280 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog (43) | |||||||||
Paralog | WBGene00006351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00009221 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00012356 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00016849 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018269 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018488 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018579 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable acetate-CoA ligase activity. Involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and regulation of response to oxidative stress. Expressed in hypodermis; intestine; neurons; and pharynx. Human ortholog(s) of this gene implicated in lymphangioleiomyomatosis; morbid obesity; and orofacial cleft. Is an ortholog of human ACSS2 (acyl-CoA synthetase short chain family member 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:3319 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15814) | ||||
DOID:0050567 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15814) | ||||||
DOID:11981 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15814) | ||||||
Molecular_info | Corresponding_CDS | C36A4.9a | |||||||
C36A4.9b | |||||||||
Corresponding_transcript | C36A4.9a.1 | ||||||||
C36A4.9b.1 | |||||||||
Other_sequence (168) | |||||||||
Associated_feature | WBsf658773 | ||||||||
WBsf976061 | |||||||||
WBsf976062 | |||||||||
WBsf976063 | |||||||||
WBsf976064 | |||||||||
WBsf981441 | |||||||||
WBsf991925 | |||||||||
WBsf1014647 | |||||||||
WBsf224659 | |||||||||
WBsf224660 | |||||||||
WBsf224661 | |||||||||
WBsf224662 | |||||||||
WBsf224663 | |||||||||
Experimental_info | RNAi_result (12) | ||||||||
Expr_pattern (12) | |||||||||
Drives_construct | WBCnstr00002175 | ||||||||
WBCnstr00004245 | |||||||||
WBCnstr00011939 | |||||||||
WBCnstr00021141 | |||||||||
WBCnstr00033341 | |||||||||
WBCnstr00042511 | |||||||||
Construct_product | WBCnstr00033341 | ||||||||
Microarray_results | SMD_C36A4.9 | ||||||||
191641_s_at | |||||||||
A_12_P112381 | |||||||||
A_12_P133080 | |||||||||
A_12_P133081 | |||||||||
A_12_P166284 | |||||||||
Aff_C36A4.9 | |||||||||
GPL13394_WBGene00007969 | |||||||||
GPL13914_C36A4.9 | |||||||||
GPL14144_C36A4.9a_707-766_0.868_44_B | |||||||||
GPL14144_C36A4.9a_900-959_0.878_35_A | |||||||||
GPL14144_C36A4.9a_964-1023_0.864_47_C | |||||||||
GPL19516_CGZ0007871 | |||||||||
GPL19516_CGZ0007872 | |||||||||
GPL19516_CGZ0007873 | |||||||||
GPL21109_C36A4.9a.1 | |||||||||
GPL3518_CE03076 | |||||||||
GPL8304_CE_WBGene00007969_A | |||||||||
GPL8304_CE_WBGene00007969_B | |||||||||
GPL8304_CE_WBGene00007969_C | |||||||||
GPL8673_C36A4_9aP00737 | |||||||||
GPL8673_C36A4_9aP00979 | |||||||||
GPL8673_C36A4_9aP01460 | |||||||||
GPL8673_C36A4_9bP00707 | |||||||||
GPL8673_C36A4_9bP00949 | |||||||||
GPL8673_C36A4_9bP01430 | |||||||||
GPL9450_C36A4.9 | |||||||||
cea2.c.17980 | |||||||||
Expression_cluster (191) | |||||||||
Interaction (93) | |||||||||
Map_info | Map | III | Position | -4.24766 | Error | 0.000156 | |||
Positive | Positive_clone | C36A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |