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WormBase Tree Display for Gene: WBGene00009979

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Name Class

WBGene00009979SMapS_parentSequenceF53F1
IdentityVersion2
NameCGC_namecutl-1Person_evidenceWBPerson52
Sequence_nameF53F1.1
Molecular_nameF53F1.1
F53F1.1.1
CE47606
Other_nameCELE_F53F1.1Accession_evidenceNDBBX284605
Public_namecutl-1
DB_infoDatabaseAceViewgene5N884
WormQTLgeneWBGene00009979
WormFluxgeneWBGene00009979
NDBlocus_tagCELE_F53F1.1
PanthergeneCAEEL|WormBase=WBGene00009979|UniProtKB=Q9XVM7
familyPTHR22907
NCBIgene186168
RefSeqproteinNM_073920.4
TREEFAMTREEFAM_IDTF315307
TrEMBLUniProtAccQ9XVM7
UniProt_GCRPUniProtAccQ9XVM7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
207 May 2008 10:04:34WBPerson2970Name_changeCGC_namecutl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcutl
AlleleWBVar01842395
WBVar01842396
WBVar02054757
WBVar01869552
WBVar01869553
WBVar02104686
WBVar01869554
WBVar01869555
WBVar01499621
WBVar02061809
WBVar01061070
WBVar01061071
WBVar01061072
WBVar01061073
WBVar01061074
WBVar01061075
WBVar01061076
WBVar01061077
WBVar01500212
WBVar01500213
WBVar01499299
WBVar00474818
WBVar00474819
WBVar00474820
WBVar00474821
WBVar00474822
WBVar00012525
WBVar01499316
WBVar00276671
RNASeq_FPKM (74)
GO_annotation00102626
Ortholog (17)
ParalogWBGene00000851Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000853Caenorhabditis elegansFrom_analysisPanther
WBGene00001063Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004301Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008482Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009041Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009961Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011948Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013960Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011104Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012165Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021919Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011443Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011928Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00010893Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011888Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013145Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017351Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019426Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013180Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015231Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021025Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012304Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020663Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017421Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018787Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021396Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021950Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022533Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044641Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF53F1.1
Corresponding_CDS_historyF53F1.1:wp188
F53F1.1:wp227
F53F1.1:wp231
Corresponding_transcriptF53F1.1.1
Other_sequencePT01957
BM01590
HC08770
Associated_featureWBsf1001813
WBsf1001814
WBsf1001815
WBsf1001816
WBsf1020717
WBsf1020718
WBsf1020719
WBsf1020720
Experimental_infoRNAi_resultWBRNAi00048128Inferred_automaticallyRNAi_primary
WBRNAi00015512Inferred_automaticallyRNAi_primary
Expr_patternExpr1022907
Expr1151938
Expr2010616
Expr2028856
Microarray_results (22)
Expression_cluster (50)
InteractionWBInteraction000370383
Map_infoMapVPosition5.25536Error0.005791
PositivePositive_cloneF53F1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene