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WormBase Tree Display for Gene: WBGene00011674

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Name Class

WBGene00011674SMapS_parentSequenceCHROMOSOME_II
IdentityVersion2
NameCGC_namecyp-13A8
Sequence_nameT10B9.4
Molecular_nameT10B9.4
T10B9.4.1
CE13541
Other_nameCELE_T10B9.4Accession_evidenceNDBBX284602
Public_namecyp-13A8
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
221 Sep 2004 09:38:16WBPerson1971Name_changeCGC_namecyp-13A8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcyp
AlleleWBVar01499702
WBVar00758601
WBVar00758602
WBVar00758603
WBVar00758604
WBVar00758605
WBVar00758606
WBVar00758607
WBVar00758608
WBVar00758609
WBVar00758610
WBVar01498435
WBVar01243512
WBVar01490001
WBVar02121959
WBVar02151133
WBVar01499234
WBVar00374835
WBVar00374836
WBVar00374837
WBVar00374838
WBVar01696217
WBVar02124392
WBVar00228122
WBVar01489354
WBVar01498940
WBVar01627074
WBVar01627075
WBVar02130544
RNASeq_FPKM (74)
GO_annotation00079953
00079954
00079955
00118907
00118908
00118909
00118910
OrthologWBGene00024321Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
WormBase-Compara
WBGene00067221Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00155635Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00128231Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00086340Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00092752Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00104757Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00119176Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00095336Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00269251Brugia malayiFrom_analysisWormBase-Compara
CSP26.g18508Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13573Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g14735Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9006Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26983Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14600Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g17683Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22197Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2328Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_II.g4015Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold560.g3892Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03861.g31464Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04740Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004790Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g12829Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g13866Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g17621Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g17830Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g17831Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g20387Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2061Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g5598Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00207944Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00239639Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00095463Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095508Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096190Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100474Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102738Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104661Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105897Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106365Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106421Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107154Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273159Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273166Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275927Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280647Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281646Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00282015Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00287393Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0015038Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0015039Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0033775Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0033982Drosophila melanogasterFrom_analysisOMA
OrthoFinder
SonicParanoid
FB:FBgn0015040Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0038037Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
ZFIN:ZDB-GENE-030131-3060Danio rerioFrom_analysisInparanoid
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-041114-102Danio rerioFrom_analysisInparanoid
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-050604-1Danio rerioFrom_analysisInparanoid
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-060929-96Danio rerioFrom_analysisInparanoid
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-030131-8805Danio rerioFrom_analysisInparanoid
OrthoInspector
SonicParanoid
HGNC:2640Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:2637Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:2638Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:11609Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:17450Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:51504Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:88609Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:88610Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:106099Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:98497Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:1858451Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:1930638Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:2449818Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:3646373Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:3714859Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:3769707Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:3826Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:628626Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:1595919Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:708392Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:628709Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:708379Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
Paralog (12)
Structured_descriptionConcise_descriptioncyp-13A8 encodes one of ~80 C. elegans cytochrome P450s: membrane-associated, heme-containing NADPH-dependent monooxygenases that catalyze the oxidative metabolism of a variety of exogenous compounds and endogenous substrates; loss of cyp-13A8 activity in large-scale RNAi screens results in low levels of embryonic lethality, sluggish locomotion, and a clear appearance.Paper_evidenceWBPaper00005654
Curator_confirmedWBPerson1843
Date_last_updated20 Nov 2008 00:00:00
Automated_descriptionPredicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Expressed in hypodermis and pharynx. Human ortholog(s) of this gene implicated in several diseases, including Ghosal hematodiaphyseal syndrome; familial Mediterranean fever; and leukemia (multiple). Is an ortholog of several human genes including CYP3A4 (cytochrome P450 family 3 subfamily A member 4); CYP3A5 (cytochrome P450 family 3 subfamily A member 5); and CYP3A7 (cytochrome P450 family 3 subfamily A member 7).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:8552Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:3526Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11609)
DOID:2987Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2637)
DOID:9952Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:0112251Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11609)
DOID:0080630Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:10825Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:1612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2637)
Molecular_infoCorresponding_CDST10B9.4
Corresponding_transcriptT10B9.4.1
Other_sequenceMI04235
MI01651
ES743048.1
PPC00382_1
MIC02148_1
Associated_featureWBsf650463
WBsf989152
WBsf1012907
WBsf1012908
WBsf1012909
Experimental_infoRNAi_resultWBRNAi00035423Inferred_automaticallyRNAi_primary
WBRNAi00053018Inferred_automaticallyRNAi_primary
WBRNAi00094897Inferred_automaticallyRNAi_primary
WBRNAi00092626Inferred_automaticallyRNAi_primary
WBRNAi00009149Inferred_automaticallyRNAi_primary
Expr_patternExpr15175
Expr1027602
Expr1156618
Expr2010688
Expr2028927
Drives_constructWBCnstr00030479
WBCnstr00042031
Construct_productWBCnstr00030479
Microarray_results (16)
Expression_cluster (127)
Interaction (34)
Map_infoMapIIPosition1.72429Error0.00034
PositivePositive_cloneT10B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042257
WBPaper00055090
WBPaper00064073
WBPaper00064598
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene