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WormBase Tree Display for Gene: WBGene00011554

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Name Class

WBGene00011554SMapS_parentSequenceT07A5
IdentityVersion2
NameSequence_nameT07A5.1
Molecular_nameT07A5.1
T07A5.1.1
CE41335
Other_nameCELE_T07A5.1Accession_evidenceNDBBX284603
Public_nameT07A5.1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Jun 2007 16:25:29WBPerson1983EventSplit_intoWBGene00045475
Split_intoWBGene00045475
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01500260
WBVar02141093
WBVar00178496
WBVar01507472
WBVar00178497
WBVar00178498
WBVar02069710
WBVar02132627
WBVar00855676
WBVar00855677
WBVar00855678
WBVar00855679
WBVar00855680
WBVar00855681
WBVar00855682
WBVar00855683
WBVar00855684
WBVar00855685
WBVar00855686
WBVar01542240
WBVar00855687
WBVar00855688
WBVar00855689
WBVar00855690
WBVar00855691
WBVar00855692
WBVar00855693
WBVar00855694
WBVar01499774
WBVar02141169
WBVar01409232
WBVar01447988
WBVar00234051
WBVar01904132
WBVar00407079
WBVar00407080
WBVar00407081
WBVar00407082
WBVar00407083
WBVar01474438
WBVar00564969
WBVar00564970
WBVar00564972
WBVar00564973
WBVar01397230
RNASeq_FPKM (74)
GO_annotation00056025
00056026
00056027
00056028
OrthologWBGene00055727Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00113240Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00303116Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00229122Brugia malayiFrom_analysisWormBase-Compara
WBGene00229123Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g5353Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g8158Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10307Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g14121Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3073Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3074Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3075Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14952Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9530Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15236Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5763Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g5765Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g20912Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g3235Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g3236Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g3237Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7386Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18065Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00006.g542Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00417.g10566Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g9548Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00332.g9566Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13498Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010501Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05802Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16373Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30118800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8840Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248455Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276626Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00291960Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003822Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000001684Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
ZFIN:ZDB-GENE-070410-96Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:3622Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
Panther
PhylomeDB
SonicParanoid
MGI:2179507Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1310087Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00020307Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020924Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020309Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00017877Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021249Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020308Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020927Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045475Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050560Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0050559Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110443Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:9884Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0112379Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110296Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110444Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110284Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
Molecular_infoCorresponding_CDST07A5.1
Corresponding_CDS_historyT07A5.1:wp178
Corresponding_transcriptT07A5.1.1
Other_sequenceDviv_isotig16807
CRC01648_1
CR04677
Associated_featureWBsf227434
Experimental_infoRNAi_resultWBRNAi00006386Inferred_automaticallyRNAi_primary
WBRNAi00052693Inferred_automaticallyRNAi_primary
Expr_patternExpr1020077
Expr1156299
Expr2005948
Expr2024165
Drives_constructWBCnstr00030565
Construct_productWBCnstr00030565
Microarray_results (12)
Expression_cluster (161)
Map_infoPositivePositive_cloneT07A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII2.29338
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00062840
WBPaper00065080
MethodGene