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WormBase Tree Display for Gene: WBGene00001105

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Name Class

WBGene00001105SMapS_parentSequenceY41D4B
IdentityVersion1
NameCGC_namedsl-3Person_evidenceWBPerson220
Sequence_nameY41D4B.10
Molecular_nameY41D4B.10a
Y41D4B.10a.1
CE27622
Y41D4B.10b
CE48623
Y41D4B.10b.1
Other_nameCELE_Y41D4B.10Accession_evidenceNDBBX284604
Public_namedsl-3
DB_infoDatabaseAceViewgene4C377
WormQTLgeneWBGene00001105
WormFluxgeneWBGene00001105
NDBlocus_tagCELE_Y41D4B.10
PanthergeneCAEEL|WormBase=WBGene00001105|UniProtKB=Q95Y10
familyPTHR22669
NCBIgene176970
RefSeqproteinNM_001380053.1
NM_067707.5
TrEMBLUniProtAccU4PBR7
Q95Y10
UniProt_GCRPUniProtAccQ95Y10
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:23WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdsl
AlleleWBVar00094423Inferred_automaticallyFrom strain object: RB2471
WBVar01648333
WBVar02007968
WBVar01648334
WBVar02007969
WBVar01648335
WBVar01648336
WBVar01648337
WBVar01648338
WBVar01648339
WBVar01648340
WBVar01648341
WBVar00568981
WBVar00568982
WBVar01499166
WBVar02133352
WBVar02133353
WBVar01898862
WBVar01898863
WBVar02118970
WBVar01964718
WBVar01964719
WBVar01725598
WBVar01725599
WBVar01725600
WBVar02123589
WBVar01725601
WBVar01725602
WBVar01725603
WBVar01725604
WBVar02041725
WBVar01725605
WBVar01725606
WBVar01725607
WBVar01725608
WBVar01725609
WBVar01725610
WBVar01831603
WBVar01725611
WBVar01725612
WBVar01831604
WBVar02122133
WBVar00247140
WBVar02013382
WBVar01702667
WBVar00417713
WBVar00417714
WBVar00417715
WBVar00417716
WBVar00417717
WBVar00417718
WBVar02079661
WBVar00887796
WBVar00887797
WBVar00887798
WBVar00887799
WBVar01499633
WBVar00887800
WBVar01853194
WBVar01853195
WBVar00887801
WBVar01853196
WBVar00887802
WBVar01853197
WBVar00887803
WBVar00887804
WBVar00887805
WBVar00887806
WBVar02077257
WBVar00887807
WBVar01494671
WBVar00887808
WBVar00887809
WBVar00887810
WBVar00184191
WBVar00184192
WBVar02103429
WBVar00184193
WBVar02103430
WBVar02103431
WBVar02103432
WBVar01900833
WBVar01687419
WBVar01687420
WBVar01996640
WBVar01687421
WBVar01687422
WBVar02019851
WBVar02019852
WBVar02019853
WBVar02019854
WBVar02057632
WBVar01481278
WBVar02057633
WBVar01500231
WBVar01579884
StrainWBStrain00033146
RNASeq_FPKM (74)
GO_annotation00089524
00089525
00089526
00108263
00108264
00108265
00108266
00108267
OrthologWBGene00068510Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00072144Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00034321Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00081937Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00086331Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00190662Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00133412Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g550Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g21669Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g702Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16498Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25532Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15257Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g23070Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6825Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4309Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-dsl-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10602Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00214.g7216Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05589Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_012328Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012375Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012418Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012419Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g9706Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00001103Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001104Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00002246Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001107Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001108Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001109Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021525Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021513Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptiondsl-3 encodes a putative secreted protein with single DSL and EGF domainsin series, somewhat like Delta/LAG-2; DSL-3 belongs to a nematode-specificfamily of Delta/LAG-2-like proteins that includes DSL-1, -2, -3, -5, -6,and -7.Paper_evidenceWBPaper00006450
Curator_confirmedWBPerson567
Date_last_updated04 Apr 2008 00:00:00
Automated_descriptionPredicted to enable Notch binding activity. Predicted to be involved in cell fate specification. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (4)
Experimental_infoRNAi_resultWBRNAi00081020Inferred_automaticallyRNAi_primary
WBRNAi00081002Inferred_automaticallyRNAi_primary
WBRNAi00063601Inferred_automaticallyRNAi_primary
WBRNAi00020476Inferred_automaticallyRNAi_primary
WBRNAi00056377Inferred_automaticallyRNAi_primary
WBRNAi00081001Inferred_automaticallyRNAi_primary
WBRNAi00067809Inferred_automaticallyRNAi_primary
WBRNAi00063608Inferred_automaticallyRNAi_primary
WBRNAi00081019Inferred_automaticallyRNAi_primary
Expr_patternExpr2846
Expr1023860
Expr1030705
Expr1159864
Expr2011107
Expr2029343
Drives_constructWBCnstr00010981
Microarray_results (20)
Expression_cluster (190)
InteractionWBInteraction000007263
WBInteraction000051472
WBInteraction000051473
WBInteraction000051490
WBInteraction000051491
WBInteraction000569675
Map_infoMapIVPosition-16.5057Error0.022376
PositivePositive_cloneY41D4BInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00006450
WBPaper00026373
WBPaper00034675
WBPaper00040714
WBPaper00043433
WBPaper00053579
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene