WormBase Tree Display for Gene: WBGene00012600

WBGene00012600 SMap: S_parent: Sequence: Y38E10A
  Identity: Version: 2
    Name: Sequence_name: Y38E10A.22
      Molecular_name: Y38E10A.22a
        Y38E10A.22a.1
        CE47846
        Y38E10A.22b
        CE35653
        Y38E10A.22c
        CE47962
        Y38E10A.22b.1
        Y38E10A.22c.1
      Other_name: CELE_Y38E10A.22 Accession_evidence: NDB BX284602
      Public_name: Y38E10A.22
    DB_info: Database: AceView gene 2M958
        WormQTL gene WBGene00012600
        WormFlux gene WBGene00012600
        NDB locus_tag CELE_Y38E10A.22
        Panther gene CAEEL|WormBase=WBGene00012600|UniProtKB=H2KMK6
          family PTHR19316
        NCBI gene 189667
        RefSeq protein NM_001267424.3
            NM_001267423.6
            NM_001267425.4
        TREEFAM TREEFAM_ID TF343318
        TrEMBL UniProtAcc E8MDV8
            Q9NAI9
            H2KMK6
        UniProt_GCRP UniProtAcc H2KMK6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Oct 2011 15:07:28 WBPerson1983 Event: Acquires_merge: WBGene00012601
      Acquires_merge: WBGene00012601
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01836566
      WBVar00777025
      WBVar00001478
      WBVar00777026
      WBVar01836567
      WBVar01949390
      WBVar00777027
      WBVar01499702
      WBVar00777028
      WBVar00001483
      WBVar01949391
      WBVar00777029
      WBVar01949392
      WBVar00777030
      WBVar00777031
      WBVar00001488
      WBVar00777032
      WBVar00381011
      WBVar00777033
      WBVar00381012
      WBVar02130928
      WBVar00001493
      WBVar00777034
      WBVar00381013
      WBVar02130929
      WBVar00381014
      WBVar02130930
      WBVar00777035
      WBVar00777036
      WBVar00381015
      WBVar00001498
      WBVar00777037
      WBVar00381016
      WBVar00777038
      WBVar00381017
      WBVar00777039
      WBVar00381018
      WBVar00001503
      WBVar00381019
      WBVar00777040
      WBVar00777041
      WBVar00381020
      WBVar00381021
      WBVar00777042
      WBVar01400592
      WBVar00001508
      WBVar00001513
      WBVar02033866
      WBVar00001518
      WBVar01498435
      WBVar00001523
      WBVar02081243
      WBVar02035965
      WBVar01696330
      WBVar01696331
      WBVar02086412
      WBVar02010111
      WBVar01315035
      WBVar01315036
      WBVar01315037
      WBVar01315038
      WBVar01490732
      WBVar02084948
      WBVar01315041
      WBVar01315048
      WBVar01892557
      WBVar01315050
      WBVar01385578
      WBVar01385589
      WBVar01917121
      WBVar01385601
      WBVar01917122
      WBVar01917123
      WBVar01917126
      WBVar01385612
      WBVar02113486
      WBVar01917127
      WBVar01385623
      WBVar02113487
      WBVar01505293
      WBVar01385634
      WBVar01505294
      WBVar01385645
      WBVar01505295
      WBVar01505296
      WBVar01605597
      WBVar01505297
      WBVar01605598
      WBVar01499956
      WBVar01605599
      WBVar02011425
      WBVar01960596
      WBVar01478246
      WBVar01248504
      WBVar01960599
      WBVar01248506
      WBVar01478247
      WBVar01248509
      WBVar01248511
      WBVar01248512
      WBVar01248513
      WBVar00238806
      WBVar01248514
      WBVar01248515
      WBVar01248516
      WBVar01248519
      WBVar01248520
      WBVar02070689
      WBVar00106290
      WBVar00106291
      WBVar00106292
      WBVar01260051
      WBVar01260062
      WBVar02052922
      WBVar01983100
      WBVar01983101
      WBVar01983103
      WBVar01983104
      WBVar01260073
      WBVar01983105
      WBVar01260084
      WBVar01559865
      WBVar01559866
      WBVar01559867
      WBVar01559868
      WBVar01559869
      WBVar01559870
      WBVar01559871
      WBVar01559872
      WBVar01559873
      WBVar01260095
      WBVar00311775
      WBVar00311776
      WBVar00311777
      WBVar00311778
      WBVar00311779
      WBVar00311780
      WBVar00311781
      WBVar00311782
      WBVar01260106
      WBVar01500009
      WBVar01500010
      WBVar01260117
      WBVar02094048
      WBVar01260128
      WBVar02007087
      WBVar02007088
      WBVar02007089
      WBVar02118896
      WBVar02067206
      WBVar02067207
      WBVar02007090
      WBVar02007091
      WBVar02007092
      WBVar02117244
      WBVar01685751
      WBVar01685752
      WBVar00554729
      WBVar01685753
      WBVar00554732
      WBVar02040706
      WBVar01685754
      WBVar02040707
      WBVar01498941
      WBVar01406227
      WBVar01406228
      WBVar01406230
      WBVar01406231
      WBVar01406232
      WBVar01406234
      WBVar02087458
      WBVar02092244
      WBVar02092245
      WBVar02018182
      WBVar00777014
      WBVar00777015
      WBVar00001463
      WBVar00777016
      WBVar00230513
      WBVar01394660
      WBVar00777017
      WBVar01394662
      WBVar00777018
      WBVar00230514
      WBVar01936253
      WBVar00001468
      WBVar00777019
      WBVar01394663
      WBVar01936254
      WBVar00777020
      WBVar01802007
      WBVar00777021
      WBVar01836563
      WBVar00001473
      WBVar00777022
      WBVar00777023
      WBVar01836564
      WBVar01836565
      WBVar00777024
    RNASeq_FPKM (74)
    GO_annotation: 00008412
      00008413
    Ortholog (22)
    Structured_description: Automated_description: Predicted to enable adenyl-nucleotide exchange factor activity. Predicted to be located in endoplasmic reticulum. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38E10A.22a
      Y38E10A.22b
      Y38E10A.22c
    Corresponding_CDS_history: Y38E10A.22:wp109
      Y38E10A.22a:wp234
      Y38E10A.22c:wp234
    Corresponding_transcript: Y38E10A.22a.1
      Y38E10A.22b.1
      Y38E10A.22c.1
    Other_sequence: CRC01068_1
      CR02586
    Associated_feature: WBsf650664
      WBsf666262
      WBsf990171
      WBsf1013478
      WBsf224089
      WBsf224090
      WBsf224091
  Experimental_info: RNAi_result: WBRNAi00056022 Inferred_automatically: RNAi_primary
      WBRNAi00020289 Inferred_automatically: RNAi_primary
      WBRNAi00036845 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024621
      Expr1035572
      Expr1159541
      Expr2007302
      Expr2025535
    Microarray_results (27)
    Expression_cluster: WBPaper00032031:DConiospora_downregulated_OligoArray_24h
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00035269:cde-1_regulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038289:oocyte_protein
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044746:aging_upregulated_Day5
      WBPaper00045417:128Q-huntingtin_upreglated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_downregulated
      WBPaper00046421:cdc-48.2(tm659)_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050686:glp-1(e2141)_downregulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00051558:aging_regulated
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055334:DLC-1_interacting
      WBPaper00055565:AVK_enriched
      WBPaper00055827:daf-2(e1370)_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056826:SGP_biased
      WBPaper00057006:DietaryRestriction_upregulated
      WBPaper00057154:HeatShock_upregulated_mRNA
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00059490:dcr-1(m9375)_downregulated
      WBPaper00059598:HeatShock_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061274:microgravity_upregulated
      WBPaper00061466:nath-10(icb99)_upregulated
      WBPaper00061466:nath-10(icb102)_upregulated
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:pro-3_11683-C44E4.1_9745
      WBPaper00061527:tub-2_4713-daf-2_5288
      WBPaper00062143:PQN-59_interacting
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062345:bortezomib_4h_upregulated_N2
      WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
      WBPaper00062456:doxycycline_downregulated_CB4856_protein
      WBPaper00062590:Aging_downregulated_neuron
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064871:hypoxia_upregulated_F2
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065225:nhr-42(tm1375)_downregulated_uninfected
      WBPaper00065315:mating_upregulated_Day2-7
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_upregulated_N2
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_17
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026980:intestine_enriched
      WBPaper00027111:eri-1(mg366)_upregulated
      WBPaper00027758:Group_IV
      WBPaper00030985:Erwinia_carotovora_upregulated
      WBPaper00032062:age_regulated_genes
      WBPaper00032165:differentially_expressed_with_age_medoid_2
      WBPaper00034739:N2lessDR1350
      WBPaper00036286:Pattern_H
      WBPaper00037695:WC_5-day
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00044091:Bpseudomallei_induced_12h
      WBPaper00045015:nhr-25(RNAi)_downregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00045294:0.1uM_TBBP_downregulated
      WBPaper00045294:50uM_DBAA_downregulated
      WBPaper00045960:L1-L4-lethargus_downregulated
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
    Interaction: WBInteraction000539677
      WBInteraction000557819
      WBInteraction000559581
      WBInteraction000568036
      WBInteraction000568775
      WBInteraction000574129
      WBInteraction000574892
      WBInteraction000583847
      WBInteraction000584177
  Map_info: Positive: Positive_clone: Y38E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 10.6818
  Method: Gene