WormBase Tree Display for Gene: WBGene00010851

WBGene00010851 SMap: S_parent: Sequence: M04C3
  Identity: Version: 1
    Name: Sequence_name: M04C3.2
      Molecular_name: M04C3.2a
        M04C3.2a.1
        CE46352
        M04C3.2b
        CE46290
        M04C3.2b.1
        M04C3.2b.2
      Other_name: CELE_M04C3.2 Accession_evidence: NDB BX284605
      Public_name: M04C3.2
    DB_info: Database: AceView gene 5T920
        WormQTL gene WBGene00010851
        WormFlux gene WBGene00010851
        NDB locus_tag CELE_M04C3.2
        Panther gene CAEEL|WormBase=WBGene00010851|UniProtKB=G1K104
          family PTHR21516
        NCBI gene 180274
        RefSeq protein NM_001383497.1
            NM_001269929.2
        TREEFAM TREEFAM_ID TF322018
        TrEMBL UniProtAcc G1K101
            G1K104
        UniProt_GCRP UniProtAcc G1K104
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar02123543
      WBVar02124282
      WBVar00091261
      WBVar01499709
      WBVar02124842
      WBVar00487923
      WBVar00487924
      WBVar00487925
      WBVar00487926
      WBVar00487927
      WBVar00487928
      WBVar00487929
      WBVar02121908
      WBVar00487930
      WBVar01499566
      WBVar02117163
      WBVar01100228
      WBVar01100229
      WBVar01100230
      WBVar02122876
      WBVar01100231
      WBVar01100232
      WBVar01100233
      WBVar01100234
      WBVar01100235
      WBVar01100236
      WBVar01100237
      WBVar01100238
      WBVar01100239
      WBVar01100240
      WBVar01100241
      WBVar01100242
      WBVar01100243
      WBVar00091149
      WBVar01100244
      WBVar02122706
      WBVar01848722
      WBVar01848723
      WBVar01848724
      WBVar01848725
      WBVar01848726
      WBVar01848727
      WBVar01848728
      WBVar01848729
      WBVar02114262
      WBVar01848730
      WBVar01848731
      WBVar02079474
      WBVar01848732
      WBVar01848733
      WBVar01848734
      WBVar01848735
      WBVar01848736
      WBVar01848737
      WBVar01499446
      WBVar01848738
      WBVar02120531
      WBVar02123481
      WBVar01498549
      WBVar02122402
      WBVar02121484
      WBVar01499299
      WBVar02122044
      WBVar02124069
      WBVar02121326
      WBVar02138296
      WBVar00316983
      WBVar02056341
      WBVar00316984
      WBVar02056342
      WBVar01498958
      WBVar02124642
    RNASeq_FPKM (74)
    GO_annotation: 00008910
      00008911
      00118192
      00118193
    Contained_in_operon: CEOP5551
      CEOP551
    Ortholog: chrV_pilon.g17898 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (30)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and ATP-dependent chromatin remodeler activity. Involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M04C3.2a
      M04C3.2b
    Corresponding_CDS_history: M04C3.2:wp87
      M04C3.2:wp227
    Corresponding_transcript: M04C3.2a.1
      M04C3.2b.1
      M04C3.2b.2
  Experimental_info: RNAi_result: WBRNAi00011171 Inferred_automatically: RNAi_primary
      WBRNAi00050893 Inferred_automatically: RNAi_primary
      WBRNAi00019970 Inferred_automatically: RNAi_primary
      WBRNAi00017173 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1154589
      Expr2005192
      Expr2023411
    Drives_construct: WBCnstr00031110
    Construct_product: WBCnstr00031110
    Microarray_results (14)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:intestine_larva_enriched
      WBPaper00037950:intestine_larva_SelectivelyEnriched
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042067:Cu2+_upregulated_kgb-1_top13
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:somatic_specific
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_downregulated
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00049905:Age_variant_expression
      WBPaper00049920:hyl-2(tm2031)_upregulated
      WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050080:rbr-2(tm3141)_upregulated
      WBPaper00050096:P.aeruginosa_upregulated
      WBPaper00050121:mir-60(n4947)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:intestine_enriched
      WBPaper00050990:intestine_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054410:set-26(tm2467)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056073:R24_upregulated_nhr-86_dependent
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056167:ifo-1(kc2)_downregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
      WBPaper00056586:kri-1(ok1251)_upregulated
      WBPaper00057154:HeatShock_downregulated_miRNA-target
      WBPaper00057154:HeatShock_upregulated_mRNA
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059373:stt-3(RNAi)_upregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00059754:E.faecalis_OG1RF_upregulated
      WBPaper00059754:P.aeruginosa_PA14_upregulated
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060278:atp-2(RNAi)_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060399:CoCl2_6hr_upregulated_N2
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061007:X.citri_upregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061405:S.aureus_upregulated_starvation
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:172183_at-176110_at
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062184:PA14_upregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064156:lipl-4(overexpress)_upregulated
      WBPaper00064632:daf-2(e1370)_upregulated_intestine
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064871:PA14_upregulated_AWA
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065029:cadmium_upregulated
      WBPaper00065086:N2_N.ausubeli_regulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
      WBPaper00065392:Lb.rhamnosus_upregulated
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
      WBPaper00065841:126_0
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4489_group_7
      WBPaper00026980:intestine_enriched
      WBPaper00028482:PA14_upregulated
      WBPaper00034661:AgNPs_downregulated
      WBPaper00034739:N2moreDR1350
      WBPaper00034739:RIL17moreRIL14
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_G
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040858:eQTL_regulated_old
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042067:Cu2+_upregulated_kgb-1_top50
      WBPaper00042067:Cu2+_upregulated_kgb-1_top66
      WBPaper00042067:Cu2+_upregulated_WT
      WBPaper00045673:colistin_upregulated
      WBPaper00046853:AOBr_LakeStobenseeAug_downregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc6390]:Cluster_B
      [cgc6390]:herm_soma-enriched
    Interaction: WBInteraction000115356
      WBInteraction000232208
      WBInteraction000266322
      WBInteraction000289568
      WBInteraction000308431
      WBInteraction000315342
      WBInteraction000316990
      WBInteraction000441974
      WBInteraction000449833
      WBInteraction000450140
  Map_info: Positive: Positive_clone: M04C3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 21.908
  Method: Gene