WormBase Tree Display for Variation: WBVar02124687
expand all nodes | collapse all nodes | view schema
WBVar02124687 | Name | Public_name | WBVar02124687 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00855610 | |||||||
Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_III | ||||
Flanking_sequences | CGTCATCACTGATTTTCCAAGCCAAGTCGC | TGCTGCAAAAATTCTAATTTCTGGTGTTTTTCTTTTTATAGCAAATATCATACTATTCCTAGTTTATCGAAAAGCTTATCGTTTTAACAGTGAGCGGAACACGGCGACATACCCAATTGTGAACAGTTTCTATAAAAAAGTGGCTTTAATAAATGCATTATATTTTATTGAATCAATCTTGATAGTTGTTAATCTAAATGTTACTAATGAATGGCTTAATAAAATTGCAATAATATTTAACAATACTATGAAAACTATCGTGATATACATAGGACAATCATGTCAAGTATTAATAGCTCTACTTGCAATTCGAAAGATTTTTATTTTCTTTTTCCCGGACACGAAACAATATTTAATGGTTACCGAATATACACTAAAGATTACTACCAATTGTATTTTATTGGTTTTTGTGCTAGGATTTTTAGCATTAAAAAGCGGGTTTTTTGGCAAAAACGCGAACATTGTTAGTTACAAAATTAGAAATTCTTCATTCAAGAATATTTTTTTAGATGGCTTATGTACTGCTCATCGTTATACTCCCCATTTGTGCATTATTTCAAATTCTGATTCAATTTGTCTCAGCTCAGCGTAATAAGTACATTTTGTGCCAATTTATTCTGGTGGTGATTATGAAAATTGTAAGTTTAGGCCTACACTTAGGCTCAGGCTTAGGCTCAGGCTTAGGCTTAGGCTTAGGCTCAGGCTTAGGCTTAGGCATATGCTGAGGCTTAGGCTAAGACTTATGAAGAGGCTCAAGCTTAGGCTTAGGCTTAAATTTAGGATTAGGCCTAGGAGCTAGTTAAAAGCTAGGCTTATGCTTGGGTTCAGGTTTAGGCTTAGTCTTAGCCTTATGACTATGCCCTTTTTCAGGAATGTTTTTGGTAACTTTCTTTAAAAAATTAATACCAATTACTATTTTAGAAATGAGTTTTTTTCAGTGCAACTTCAGAAAAATTTCAAAAAATTTAATTGAAAAAATTTAATTTTTGCATAAACTAAGCAGGTGAACTTCGCCAAAGTTTACCGAAATCGAATCTCAGTCTTCTGGTCCATTTTAATTGCATTTTTGCAGACTTGTTGTATAATGTCTCTTTTCCGAGTTCAGGCCACAATTCATGAGGTTTATTTACATATTACATACTAAAATTCCAATTTGTTTTTTCAAAATTTCAGGTTTTTCAAGCCGCTGAGTTATCAGATTGCTTTCTCACTCCTGTCTTTATTAAAATATCCTATTTAATGTACCATCGGCCCAGTTTTAAAACATTTTGTAAATGTTTGAATTGCTGTAAATGTTTCAAAACGACTACAGTTGAACCACTGGGACATAGACAAGAAATTTTTGCGATAAATGCTAATTAATGTTGCCAGTAACTGAATGAACCTATTTTAATTGAAAATGGGTAAATAAAATATGCTGAATTCAAAAAATCTAAAGTTAACCCACCAAAAACTATCAAAAAGAGACAAAAATGGGCAATTGAACATGTTTGATTTTGTCAGTGCACATGTTTTTTTTGGTCAGTGCAAATTTTTTTTGGTCAGTGCAAATTTTTTTTGGTCAGTGCAGTTCCACCTGTCATTGTTTCAGCAGGTTGATCTGTAGAACAACAGTTTTCTAAACTCTACAAATATTTATTATTCATGTGTATTAACAAATTAGACTACATTCTGGAGATATACACGCTCCATCTACAATGTACAACGATAGAAAATTTAGAGCCATTGGTAGAGTATTCGAACTTAGCCGTATCAGGATGTTCCCTCGGAAATTCAATGATTGGCTGAAACAATCTTGAAACATCTGTTTCCGTCCAACATTCAAATACG | ||||||
Mapping_target | CHROMOSOME_III | |||||||
Source_location | 225 | CHROMOSOME_III | 1245001 | 1264000 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022481 | ||||||
WBGene00022495 | ||||||||
WBGene00022485 | ||||||||
WBGene00022482 | ||||||||
WBGene00044675 | ||||||||
WBGene00022496 | ||||||||
WBGene00022494 | ||||||||
WBGene00022484 | ||||||||
WBGene00022483 | ||||||||
Transcript | Y119D3B.19.1 | |||||||
Y119D3B.22.1 | ||||||||
Y119D3B.3.1 | ||||||||
Y119D3B.4.1 | ||||||||
Y119D3B.6.1 | ||||||||
Y119D3B.7.1 | ||||||||
Pseudogene | Y119D3B.20 | |||||||
Y119D3B.5 | ||||||||
Y119D3B.18 | ||||||||
Remark | The boundaries of this variant have been identified only approximately | |||||||
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous | ||||||||
Method | WGS_Flibotte |