WormBase Tree Display for Gene: WBGene00022494
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| WBGene00022494 | SMap | S_parent | Sequence | Y119D3B | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxa-91 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | Y119D3B.18 | |||||||||
| Molecular_name | Y119D3B.18 | |||||||||
| Other_name | CELE_Y119D3B.18 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | fbxa-91 | |||||||||
| DB_info | Database | AceView | gene | 3C342 | ||||||
| WormQTL | gene | WBGene00022494 | ||||||||
| WormFlux | gene | WBGene00022494 | ||||||||
| NDB | locus_tag | CELE_Y119D3B.18 | ||||||||
| NCBI | gene | 191045 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-91 | |||||
| 3 | 17 Sep 2018 14:56:39 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxa | |||||||||
| Allele (31) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00080372 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| Paralog (216) | ||||||||||
| Structured_description | Concise_description | fbxa-91 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXA-91 also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | ||||||
| Curator_confirmed | WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in AFD; intestine; rect_D; rect_VL; and rect_VR based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including methylmercuric chloride; Rifampin; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y119D3B.18:wp267 | ||||||||
| Corresponding_pseudogene | Y119D3B.18 | |||||||||
| Associated_feature | WBsf991259 | |||||||||
| WBsf1014204 | ||||||||||
| Experimental_info | Expr_pattern | Expr1012807 | ||||||||
| Expr1159017 | ||||||||||
| Expr2011587 | ||||||||||
| Expr2029826 | ||||||||||
| Drives_construct | WBCnstr00024205 | |||||||||
| Construct_product | WBCnstr00024205 | |||||||||
| Microarray_results (24) | ||||||||||
| Expression_cluster (104) | ||||||||||
| Map_info | Map | III | Position | -22.5757 | ||||||
| Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
