WormBase Tree Display for Gene: WBGene00022494
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WBGene00022494 | SMap | S_parent | Sequence | Y119D3B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | fbxa-91 | Person_evidence | WBPerson655 | |||
Sequence_name | Y119D3B.18 | ||||||
Molecular_name | Y119D3B.18 | ||||||
Other_name | CELE_Y119D3B.18 | Accession_evidence | NDB | BX284603 | |||
Public_name | fbxa-91 | ||||||
DB_info | Database | AceView | gene | 3C342 | |||
WormQTL | gene | WBGene00022494 | |||||
WormFlux | gene | WBGene00022494 | |||||
NDB | locus_tag | CELE_Y119D3B.18 | |||||
NCBI | gene | 191045 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Gene_class | fbxa | ||||||
Allele (31) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00080372 | Caenorhabditis remanei | From_analysis | TreeFam | |||
Paralog (216) | |||||||
Structured_description | Concise_description | fbxa-91 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXA-91 also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in AFD; intestine; rect_D; rect_VL; and rect_VR based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including methylmercuric chloride; Rifampin; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | Y119D3B.18:wp267 | |||||
Corresponding_pseudogene | Y119D3B.18 | ||||||
Associated_feature | WBsf991259 | ||||||
WBsf1014204 | |||||||
Experimental_info | Expr_pattern | Expr1012807 | |||||
Expr1159017 | |||||||
Expr2011587 | |||||||
Expr2029826 | |||||||
Drives_construct | WBCnstr00024205 | ||||||
Construct_product | WBCnstr00024205 | ||||||
Microarray_results (24) | |||||||
Expression_cluster (104) | |||||||
Map_info | Map | III | Position | -22.5757 | |||
Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |