WormBase Tree Display for Variation: WBVar00274962

WBVar00274962 Evidence: Paper_evidence: WBPaper00005044
  Name: Public_name: v33
    HGVSg: CHROMOSOME_II:g.8124162_8125040del
  Sequence_details: SMap: S_parent: Sequence: C41C4
    Flanking_sequences: ccgtatcccttccatttattacgttggctta gtttgatgaaaagaatcgtggaaagacctg
    Mapping_target: C41C4
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033316
    Laboratory: RE
    Status: Live
  Affects: Gene: WBGene00002147
    Transcript: C41C4.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-600
        CDS_position: ?-530
        Protein_position: ?-177
        Intron_number: 2-4/11
        Exon_number: 1-5/12
    Interactor (141)
  Isolation: Mutagen: EMS
  Genetics: Interpolated_map_position: II 0.694564
  Description: Phenotype (20)
    Phenotype_not_observed (8)
  Reference (13)
  Remark: A 878 bp deletion extending from 199 bp upstream of the ATG start codon to bp 679 of ire-1 gene. Paper_evidence: WBPaper00005044
  Method: Deletion_allele