WormBase Tree Display for Sequence: C41C4
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C41C4 | DNA | C41C4 | 39750 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (18) | ||||
CDS_child (360) | ||||||
Transcript (27) | ||||||
PCR_product (27) | ||||||
Allele (496) | ||||||
Oligo_set | Aff_C41C4.1 | 7029 | 6267 | |||
Aff_C41C4.2 | 1665 | 903 | ||||
Aff_C41C4.3 | 10271 | 9514 | ||||
Aff_C41C4.4 | 13898 | 13198 | ||||
Aff_C41C4.5 | 22300 | 23238 | ||||
Aff_C41C4.6 | 32816 | 34829 | ||||
Aff_C41C4.7 | 36383 | 35407 | ||||
Feature_object (559) | ||||||
Feature_data | C41C4:Polysome | 1 | 39750 | |||
C41C4:TranscriptionallyActiveRegion | 1 | 39750 | ||||
C41C4:ChIPSeqTF | 1 | 39750 | ||||
C41C4:Dust | 1 | 39750 | ||||
C41C4:inverted | 1 | 39750 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_II | |||
Overlap_right | F10B5 | 39652 | ||||
Overlap_left | K02C4 | |||||
Clone_left_end | C41C4 | 1 | ||||
F10B5 | 39652 | |||||
Clone_right_end | K02C4 | 6197 | ||||
DB_info | Database | EMBL | NDB_AC | Z48045 | ||
NDB_SV | Z48045.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Burton J | ||||
From_laboratory | HX | |||||
Date_directory | 941222 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | C41C4 | ||||
Reference | WBPaper00014252 | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | b2843714ae4e82b6f4b6c0c2fb7e31d4 | ||||
Status | Finished | 22 Dec 1994 00:00:00 | ||||
Submitted | 01 Feb 1995 00:00:00 | |||||
Annotated | 31 Jan 1995 00:00:00 | |||||
Map | Sequence-II | Ends | Left | 4811 | ||
Right | 4831 | |||||
Interpolated_map_position | II | 0.68712 | ||||
Assembly_tags | Clone left end | 1 | 4 | Start of C41C4 | ||
39652 | 39655 | Start of F10B5 | ||||
annotation | 6031 | 6036 | 668 only has 3 A's otherwise fine | |||
12441 | 12452 | This read diverges, but I think it is a mis-ligation as anoSingle read diverges | ||||
18634 | 18634 | Point mutation | ||||
22497 | 22497 | Point Mutation | ||||
23406 | 23406 | Point Mutation | ||||
25108 | 25108 | Point Mutation | ||||
29149 | 29149 | missing base | ||||
Clone right end | 6194 | 6197 | End of K02C4 | |||
Method | Genomic_canonical |