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WormBase Tree Display for Sequence: C41C4

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Name Class

C41C4DNAC41C439750
SMapS_childGene_child (18)
CDS_child (360)
Transcript (27)
PCR_product (27)
Allele (496)
Oligo_setAff_C41C4.170296267
Aff_C41C4.21665903
Aff_C41C4.3102719514
Aff_C41C4.41389813198
Aff_C41C4.52230023238
Aff_C41C4.63281634829
Aff_C41C4.73638335407
Feature_object (559)
Feature_dataC41C4:Polysome139750
C41C4:TranscriptionallyActiveRegion139750
C41C4:ChIPSeqTF139750
C41C4:Dust139750
C41C4:inverted139750
Homol_data (20)
StructureFromSourceCHROMOSOME_II
Overlap_rightF10B539652
Overlap_leftK02C4
Clone_left_endC41C41
F10B539652
Clone_right_endK02C46197
DB_infoDatabaseEMBLNDB_ACZ48045
NDB_SVZ48045.1
KeywordHTG
EMBL_dump_infoEMBL_dump_methodworm_EMBL-dump
OriginFrom_authorBurton J
From_laboratoryHX
Date_directory941222
SpeciesCaenorhabditis elegans
StrainWBStrain00000001
VisibleCloneC41C4
ReferenceWBPaper00014252
PropertiesGenomic_canonical
ChecksumMD5b2843714ae4e82b6f4b6c0c2fb7e31d4
StatusFinished22 Dec 1994 00:00:00
Submitted01 Feb 1995 00:00:00
Annotated31 Jan 1995 00:00:00
MapSequence-IIEndsLeft4811
Right4831
Interpolated_map_positionII0.68712
Assembly_tagsClone left end14Start of C41C4
3965239655Start of F10B5
annotation60316036668 only has 3 A's otherwise fine
1244112452This read diverges, but I think it is a mis-ligation as anoSingle read diverges
1863418634Point mutation
2249722497Point Mutation
2340623406Point Mutation
2510825108Point Mutation
2914929149missing base
Clone right end61946197End of K02C4
MethodGenomic_canonical