WormBase Tree Display for Variation: WBVar00250782

WBVar00250782 Name: Public_name: tm1818
    Other_name: Y67A6A.2a.1:c.223_248-509del
      Y67A6A.2c.1:c.223_248-509del
    HGVSg: CHROMOSOME_I:g.9839831_9840488del
  Sequence_details: SMap: S_parent: Sequence: Y67A6A
    Flanking_sequences: gctttacctgtaacaatgcacacatcaaca ctgtaactatatatatatatatatgtcaat
    Mapping_target: Y67A6A
    Source_location: 7 CHROMOSOME_I 9839830 9840489 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1818_external
      tm1818_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000029
      WBStrain00000030
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1818
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003652
    Transcript: Y67A6A.2c.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y67A6A.2c.1:c.223_248-509del
        cDNA_position: 232-?
        CDS_position: 223-?
        Protein_position: 75-?
        Intron_number: 2/7
        Exon_number: 2/8
      Y67A6A.2a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y67A6A.2a.1:c.223_248-509del
        cDNA_position: 234-?
        CDS_position: 223-?
        Protein_position: 75-?
        Intron_number: 2/7
        Exon_number: 2/8
    Interactor: WBInteraction000542463
      WBInteraction000542465
      WBInteraction000542468
      WBInteraction000542470
      WBInteraction000542587
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
    Mapping_data: In_multi_point: 5233
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 24419/24420-25077/25078 (658 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele