WormBase Tree Display for Variation: WBVar00250782

WBVar00250782 Name: Public_name: tm1818
    Other_name: Y67A6A.2a.1:c.223_248-509del
      Y67A6A.2c.1:c.223_248-509del
    HGVSg: CHROMOSOME_I:g.9839831_9840488del
  Sequence_details: SMap: S_parent: Sequence: Y67A6A
    Flanking_sequences: gctttacctgtaacaatgcacacatcaaca ctgtaactatatatatatatatatgtcaat
    Mapping_target: Y67A6A
    Source_location: 7 CHROMOSOME_I 9839830 9840489 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1818_external
      tm1818_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000029
      WBStrain00000030
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1818
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003652
    Transcript: Y67A6A.2c.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y67A6A.2c.1:c.223_248-509del
        cDNA_position: 232-?
        CDS_position: 223-?
        Protein_position: 75-?
        Intron_number: 2/7
        Exon_number: 2/8
      Y67A6A.2a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y67A6A.2a.1:c.223_248-509del
        cDNA_position: 234-?
        CDS_position: 223-?
        Protein_position: 75-?
        Intron_number: 2/7
        Exon_number: 2/8
    Interactor: WBInteraction000542463
      WBInteraction000542465
      WBInteraction000542468
      WBInteraction000542470
      WBInteraction000542587
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
    Mapping_data: In_multi_point: 5233
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark (2)
  Method: NBP_knockout_allele