WormBase Tree Display for Gene: WBGene00003652
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| WBGene00003652 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_I | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-62 | Person_evidence | WBPerson600 | |||||
| Sequence_name | Y67A6A.2 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_Y67A6A.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nhr-62 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (67) | |||||||||
| Strain | WBStrain00035350 | ||||||||
| WBStrain00035351 | |||||||||
| WBStrain00035352 | |||||||||
| WBStrain00036320 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in several structures, including excretory cell; intestine; neurons; spermatheca; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y67A6A.2a | |||||||
| Y67A6A.2b | |||||||||
| Y67A6A.2c | |||||||||
| Y67A6A.2d | |||||||||
| Corresponding_CDS_history | Y67A6A.2:wp47 | ||||||||
| Corresponding_transcript | Y67A6A.2a.1 | ||||||||
| Y67A6A.2b.1 | |||||||||
| Y67A6A.2c.1 | |||||||||
| Y67A6A.2d.1 | |||||||||
| Other_sequence (20) | |||||||||
| Associated_feature (11) | |||||||||
| Transcription_factor | WBTranscriptionFactor000667 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00115756 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037723 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004776 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003972 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070622 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057976 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070623 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00001160 | ||||||||
| WBCnstr00001161 | |||||||||
| WBCnstr00001162 | |||||||||
| WBCnstr00012882 | |||||||||
| WBCnstr00017066 | |||||||||
| WBCnstr00018060 | |||||||||
| WBCnstr00018271 | |||||||||
| WBCnstr00018272 | |||||||||
| WBCnstr00035969 | |||||||||
| Construct_product | WBCnstr00017066 | ||||||||
| WBCnstr00018060 | |||||||||
| WBCnstr00018272 | |||||||||
| WBCnstr00035969 | |||||||||
| Regulate_expr_cluster | WBPaper00044037:eat-2_regulated_nhr-62_dependent | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (208) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | I | Position | 3.91416 | Error | 0.00372 | |||
| Positive | Positive_clone | K10C3 | |||||||
| Y67A6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 5233 | |||||||
| 4721 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00044037 | |||||||||
| WBPaper00053206 | |||||||||
| WBPaper00053706 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00062515 | |||||||||
| WBPaper00064543 | |||||||||
| Remark | K10C3.1 has been fused into Y67A6A.2 [sdm 05/00] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
