WormBase Tree Display for RNAi: WBRNAi00088421
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| WBRNAi00088421 | Homol | Homol_homol | K08A8:RNAi | ||
|---|---|---|---|---|---|
| Y45G5AM:RNAi | |||||
| F08H9:RNAi | |||||
| F10G7:RNAi | |||||
| Sequence_info | DNA_text | ATGTGTCATCCAATCGAATTCTGCATTTGCACCATAAGTGACGCGTCCGCGCACACGTCCTCTTCTCGGACATCTTTCTGTACACCCTCTACATCTCACATTGTCTCTCCCTCTTTCCCTATCTGCATCGCAGCTAAATGCTCGCGTTGCGGTTGCGTCGCGGCCATGTTTTATGCCGACTTCGTTTTGTCGAAGAAAGGTCCCCTTTCAAAAGTGTGGCTTGCCGCTCATTGGGAGAAAAAGCTTTCGAAAGCTCAAATTTTTGAGACCGATGTTGATGAAGCTGTGAACGAAATTATGCAACCATCTCAAAAACTGGCACTCCGTACCACTGGTCATTTGCTATTAGGAATCTGCAGAGTTTATTCAAGAAAGACAAAATATCTTCTTGCTGATTGTAACGAAGCATTCCTCAAAATCAAGCTTGTTTTCCGTTCCGGTGCTCTGGACCAGCCAAATCCAGTTTTGCCTACGTTTTCCATCCAGGACATCTACGGAGATTTCGGTGACAATGTTTTGCCAGAGTTTGACGAAGAGGAGCTCAATCACGCGCCCATTTGCCAGAGCCGTCTTGACGATATCACATTGAAAGAGGATATTCCTCAAAAGTTCACTTACAACTATGGAGAACCTCTTGAGGATGATGACTTCGGAGAAATCGCTGCTGGTGTTGGACCAGAGGACTATTACCGTTTAATGGAAGATGTTAACAAAATGGATCTTGAGATGGAATTGGCACGTGATGCTGCCACAACAAGTGACAACTTGTTTGGTCGTGAACGCGAGCCAACTCCATTCTTGAACGATGCACACGCCCCCGGAAACGCAATTTTCGGTGATGAAGACTTTGCTGGTGGTGACATGGATGATGACGATCACAACGTTCAAGGATCTTCTGGATTCACTGACAACAATGCTATGCACATGGAAGACATGGACTACGAATCCGGCAACACAATGATGCGTGGAGAAACTCCACTCCGTTCTGACACTCCGAACACTTTCCGTGCACCGAGCCCAGCCCCGTCTATTGCTCCGTCGGTTGCCACCTCTGTCAGCGCAATGGAACACGATACTATCGAGTCATATTATGAGCGTCAAGCTCAGAAGCGTGCAATGCAGAAAGAGCAAAACATGAGGAAACGCCGTGTTGATGATGTCAAGATGATCACTGGAGAAGAGATGAAGGGCAATATGGCTGATTTTAGCGATATTCTTACTCGCCTTGATTTGGCCCCGCCGTCGCGCAAGCTGATGATGGGAAAGAAACGCAGTCACGCCGAGTATATGCACCACAATCCTGGAATGATTGGATTCTCAAAGAACAAACAGTTTATCCGAAAATATCAGAGTTATTTGGTAGTTACCAAGCACGACGACGTTGACGAGAAAAACGAGTGGATCAAAAACGCTTTGGGTCTTCGTGAGATTGGAGAAGAAGAGCTGCAACAGCAGCAACAAGAAATGGATATGCATGTTCAGGACGATTCATCGTATGTCGACGACTTTGACGAGGTTCCACCACTCGACTTTGATCAACTGGATATGATGGATATGCCACAATCGATGGATGATATCAACATGGTCGACGATGATGTACCACAGCGTAACCCATTGTCACCGTTTGCCCCGATGGTCGAAGATGAGGAGATGTCTCCAAGTGAGAAGCGCAAGAAGCGTGATGAAGAGAAAGAAGAGCCAGAGACTGACGAGGATAACCGCTGGTCAAAGAGAACTCACGCGTTGTTGCAGAACATTGCGACTAAATTGGAAAATCAAAATGGACAGGTTGAACTGGATGAAATGTTGAAGAAGGGAACAAGTCGAAAGGTGGCTGCCGCCAAGTTCTACTCTCTTCTGTGTCTGAAAAAGAATCAGTGCATCGATATCGAACAGAAGGAGCCATACGGAGACATTATGATTAAGGCCGGGCCCAATATCAACATCAACACGATCTAA | |||
| ATGGTGATAAGCATCGATGTACCGCTCAAAGCGTCGGAGGAAGCGACTGTGAAGTTCCTATTAGGAATAGTTTTTGGTTCTCACAAGAAACTCGGCTTGCAATCAAATCGTCGTGAGTGCTTCAGACACGATGTTCTTCAAGCAAGCAAGCTCATTCAGTGGATTCTCAGTAACGAGAGGAAAAACAGAAGATCTCTCTCCATTGCGTGTAATTTGGTGTACGGAAACACCATAGTTCTCAGTACTCAAGTTGCTCGACTTCTTCAAGATGCAATTCGTGCTCGAGAGATCGTCGCATTCACTTCGTACCTCGCGGAAGAAGATGAGAGGAAACGAAAAACTCGTGAACAGATGGAAGGTGACAACTCTAAAACACCAAAGAAGAAGAGAAGAACGATGGTTGAGGAATTTCCTCTCACTCCTACCCCGATCAGTGTGGCTCTAAAACAAAACATTACAATGCCAGATGTTCTCAGTCTTCACAAGAACGACCAAATTAACGTTGAAGACGATTTGGCTGCACCAACAATGGAACAACTTGAAATGATGTACGGGATGTTGGAATCAGAAAATCGGAACACAGCGATTGATTTAACATTCATCGATCGATATTCCTCCAACGATTGCCGTCAAAATGTTCATAATCTGAATTTGGAGACTGATTTTCAACGCCCATCTGATGACTTTATCCGGAGCCAGCTCATGACACCTACCAAATCTATTCCACAAGAAGAGGAATTTCAACCAGCCACACACCTGAAGGAAATGCTTCTTTTCCGCCAACTCCCCATCACACTAGACGAAACTGAGAGAAGAAGAAGCATGGAAGAAGAAATGGAGGAAGCGAGGAACTCTGGAATCAACACCGAGTTTATTCCGCCACAACAAATGGATGTTCCACGACTTGTCTCGGAAAACATGGATCTAGATGACGAAGTTTCGATTCCAATAAGAATTCCCAAAGTTCCTCTTAGTGCTACAAAGAAACAAACGTCTGAGAACGAAGGAGCAGAAGAAGGGATCAATTATAAAATTCCATTAAGAGAAATGCATCACATAATGGAAGATTATTCCAGTCTTCACTTCAAAGACCCGGAGCCTCTATACCGAAAGACAAGCAAAGTGATGAATTTAAAAGAGCTGTTGAACCCAATTCCTTACTTCCTTCGAAAAGGATGCAATACAGACATGTGGGATCTGTTCAAGGTGAAAACGAGGAAGTTTGATTCCACAATTGGCCACGATGTATCTGATACTGAAGAAGAGGACGAAGACGAGGAGACTGAGAGAAGAAATCGACTTAAAGCTGAACTTGAGCCCTTGGAGACCATCGACTTGTCACAGATGAAGTTCATGACGACTCCACTGAAGGATAAAAGTCCTATATTGACTCCAGTGCATCGACCGGAAGAAATTGAGTTTCGTGAAGAGCTCGAACTTCCACGGTTTGAACAATTTGAGCCGATGAATGTGAATCCGATTTCTCCAAAAATGGAAGAGCCGGCGCTATTTGAAGACAACTGGAACTCCAAACCGACGTGGTCAAATACAAGTTCTGAAAACATTGCGGATGCGCTCACCATCCGTGGGAATATTATTCGCCAGCTGGATGATAAAAGCCCCTTCGAGGTCACTCTGGATTCGATGATCCCGGTTGCTGCGACATCTCGACGAGAAGCTGCTCGGACATTCTATACAGTTCTTGAGCTCCTCAAAGAACGCAAGATTAAGGCCACTCAACGTGCTCCGTATGAAAATATCGATTTGCTGCTATCAACGGATGATAGTGAAGATATCGACGATCTGGCAATGGCTGATTTCTAA | |||||
| ATGTTCTATGCACAGTTCGTTCTCGCCAAAAAGGGACCGTTGGCAAAAGTGTGGCTGGCAGCTCACTGGGAAAAAAAGCTGACAAAGGCGCAAATCTTCGAAACAGATGTTCCCCAAGCGATCGAGGAAGTCATTCGCCCCAAGGTTAAAATGGCGCTCCGAACAGTTGGACATCTTCTCCTTGGAATCGTGAGAATCTACTCGAAGAAGACACGATATCTTCTGGCTGATACAAATGAAGCGTATCAAAAGATGAAGATTAACTTCCGCAACGGATTCAGTTTTGAAGTCGACATTCCAGAGAATGCAGAAATTGAAGAGGATTTCTCAAACTTCATTGATAAGTACAATATCACAGTGCCCGAGTTCCACGATGCCGACTACAATGAGCAGCTCATTATGGCTAATGTGAGCCGTCGTGAAGACATCACCATGAAAGAAACCGTCAATTTCAATGTCGAGTTCAACATTGACGCAGATTTCGATGGGTTCGGTGACGAAGGAGAATCTTGGCAACTCGATCATCTCTACGGATCGGTGGAACCTTTGTCTTTGCGCCCCACTCCTCAGCCAGAATCGTTGATGGAAGTCGAACGAGATCGTGATGTGGCTGCAAATGGAACGGAAATTTCCCGTATAGATGCGGATAGTGTGATTTTCTCCGAAGGACCAACACGTCCAAATCTTATTTTTGACAATCAGGAAGGCGGAAATTTCATGCCTGAAATGAACCTGAAGGTTGAGAATCAAACACTGGAAAACGATGGTGGTGTTGGGCCTGCTGATATGTTCAGCTCAATGATTCATCCCGTCAGAGAGCATGCTGTCGCAGATGTTCAAAACGACGATGGTATGGACTTTGACTATCAACCGTTCGAGCCTGAAAACGTTGAGCCATCGAGACCACAAAGTCCCGAGTCATTTGCCCTGGAGCCTCTAGATGTGGAGCACATGGAAGGACGGAAAAAACGTCAGAGAAAAGCGAGAAAGCTGATTGTCGATGCTGAAACTATGATTTCAAACGACGCTTTCCGAGAGCAACAAGAAGACTTCTCCGATACGATGCGAGTAGTTGAAATGGCGCCTCCTACCAGAAAGATGTTCAATTTATGCGTCAGCGGAGATCTTCAACACCTCAGCCGTGAACCTGGATGCAAAATGTTCAACAGAGAACTCCTTCAAAGATACAGGAGATGTTTGGTCACCCGAGAGTTCGATCTCAATTACACCATGCAAGAGTTGAGCGATAGTTCGAGTTTCACTCCGTCAATGGAAGCTCAAGCTGAGCCATGGGAGGACTTGAACCTCAATGAGGACATTCAAGAAGATATTCAAGCGCAGGGACCAGCCGTTGATGAATTCTTTAATGATGTGCGCATGGATGATGATGATGACAGACAACCAGCTCAGGAAATGGACTTTGGTGACAACTTCGATTTTCCACAAGAAGTAGAACATCAAGAGTGTGCTCCGATCCCTATCCAGAGTGGATTCGCTGGAGAGAACAAAGAGAACGAGGACGCAGAGGATTGGTCTGATCCGTTCGGTTCTTCAAATTCCAGCAGACGTGGCCAGCTTGAAGCCTATGGATTCGGAAATACTTCGACCTACAAGGAAGACGATGGCAAATGGGCGAAACGCGCCAAGCACATTCTAAAGAAAGTCTCCGCGGATATTGAGACTTCGGGACAAGCGGACTTCTCATCTGTCACAGCAACTGCCAAGAATCGCAAGCAAGCTGCAGAGCAATTTTATTCGTTGCTTACCCTGGCCAAGTCTCAAGCAATAAGTGTTGATCAATCAGAGCCATACGGAGAGATCGTAATTCGTCCAGGAGCCAATTTCAAAGAAGCATGTCCACTGAGCTCTCCGAAACCGATGGGACTTGGAAATACAATGGAAAATTCCACTATGAGAACCCCAATGAGACCAGTTTAA | |||||
| Experiment | Laboratory | YM | |||
| Date | 01 Jun 2003 00:00:00 | ||||
| Strain | WBStrain00000001 | ||||
| Temperature | 20 | ||||
| Delivered_by | Soaking | ||||
| Inhibits | Predicted_gene | F08H9.1 | Inferred_automatically | RNAi_primary | |
| K08A8.3b | Inferred_automatically | RNAi_primary | |||
| K08A8.3a | Inferred_automatically | RNAi_primary | |||
| F10G7.4 | Inferred_automatically | RNAi_primary | |||
| K08A8.3c | Inferred_automatically | RNAi_primary | |||
| K08A8.3d | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00004737 | Inferred_automatically | RNAi_primary | ||
| WBGene00000592 | Inferred_automatically | RNAi_primary | |||
| WBGene00000591 | Inferred_automatically | RNAi_primary | |||
| Transcript | K08A8.3a.1 | Inferred_automatically | RNAi_primary | ||
| K08A8.3d.1 | Inferred_automatically | RNAi_primary | |||
| F08H9.1.1 | Inferred_automatically | RNAi_primary | |||
| F10G7.4.1 | Inferred_automatically | RNAi_primary | |||
| K08A8.3c.1 | Inferred_automatically | RNAi_primary | |||
| K08A8.3b.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00005937 | ||||
| Phenotype | WBPhenotype:0000050 | Remark | The triple RNAi [coh-1(RNAi); scc-1/coh-2(RNAi); coh-3(RNAi)] caused essentially the same embryonic phenotypes as scc-1/coh-2(RNAi). | ||
| Penetrance | Complete | ||||
| WBPhenotype:0000773 | Remark | The triple RNAi [coh-1(RNAi); scc-1/coh-2(RNAi); coh-3(RNAi)] caused essentially the same embryonic phenotypes as scc-1/coh-2(RNAi). | |||
| Penetrance | Complete | ||||
| Remark | paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors used yk226d1 (coh-1), yk72e8 (coh-3) and yk256h5(scc-1/coh-2). | ||||
| Method | RNAi |
