WormBase Tree Display for RNAi: WBRNAi00088421
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WBRNAi00088421 | Homol | Homol_homol | K08A8:RNAi | ||
---|---|---|---|---|---|
Y45G5AM:RNAi | |||||
F08H9:RNAi | |||||
F10G7:RNAi | |||||
Sequence_info | DNA_text | ATGTGTCATCCAATCGAATTCTGCATTTGCACCATAAGTGACGCGTCCGCGCACACGTCCTCTTCTCGGACATCTTTCTGTACACCCTCTACATCTCACATTGTCTCTCCCTCTTTCCCTATCTGCATCGCAGCTAAATGCTCGCGTTGCGGTTGCGTCGCGGCCATGTTTTATGCCGACTTCGTTTTGTCGAAGAAAGGTCCCCTTTCAAAAGTGTGGCTTGCCGCTCATTGGGAGAAAAAGCTTTCGAAAGCTCAAATTTTTGAGACCGATGTTGATGAAGCTGTGAACGAAATTATGCAACCATCTCAAAAACTGGCACTCCGTACCACTGGTCATTTGCTATTAGGAATCTGCAGAGTTTATTCAAGAAAGACAAAATATCTTCTTGCTGATTGTAACGAAGCATTCCTCAAAATCAAGCTTGTTTTCCGTTCCGGTGCTCTGGACCAGCCAAATCCAGTTTTGCCTACGTTTTCCATCCAGGACATCTACGGAGATTTCGGTGACAATGTTTTGCCAGAGTTTGACGAAGAGGAGCTCAATCACGCGCCCATTTGCCAGAGCCGTCTTGACGATATCACATTGAAAGAGGATATTCCTCAAAAGTTCACTTACAACTATGGAGAACCTCTTGAGGATGATGACTTCGGAGAAATCGCTGCTGGTGTTGGACCAGAGGACTATTACCGTTTAATGGAAGATGTTAACAAAATGGATCTTGAGATGGAATTGGCACGTGATGCTGCCACAACAAGTGACAACTTGTTTGGTCGTGAACGCGAGCCAACTCCATTCTTGAACGATGCACACGCCCCCGGAAACGCAATTTTCGGTGATGAAGACTTTGCTGGTGGTGACATGGATGATGACGATCACAACGTTCAAGGATCTTCTGGATTCACTGACAACAATGCTATGCACATGGAAGACATGGACTACGAATCCGGCAACACAATGATGCGTGGAGAAACTCCACTCCGTTCTGACACTCCGAACACTTTCCGTGCACCGAGCCCAGCCCCGTCTATTGCTCCGTCGGTTGCCACCTCTGTCAGCGCAATGGAACACGATACTATCGAGTCATATTATGAGCGTCAAGCTCAGAAGCGTGCAATGCAGAAAGAGCAAAACATGAGGAAACGCCGTGTTGATGATGTCAAGATGATCACTGGAGAAGAGATGAAGGGCAATATGGCTGATTTTAGCGATATTCTTACTCGCCTTGATTTGGCCCCGCCGTCGCGCAAGCTGATGATGGGAAAGAAACGCAGTCACGCCGAGTATATGCACCACAATCCTGGAATGATTGGATTCTCAAAGAACAAACAGTTTATCCGAAAATATCAGAGTTATTTGGTAGTTACCAAGCACGACGACGTTGACGAGAAAAACGAGTGGATCAAAAACGCTTTGGGTCTTCGTGAGATTGGAGAAGAAGAGCTGCAACAGCAGCAACAAGAAATGGATATGCATGTTCAGGACGATTCATCGTATGTCGACGACTTTGACGAGGTTCCACCACTCGACTTTGATCAACTGGATATGATGGATATGCCACAATCGATGGATGATATCAACATGGTCGACGATGATGTACCACAGCGTAACCCATTGTCACCGTTTGCCCCGATGGTCGAAGATGAGGAGATGTCTCCAAGTGAGAAGCGCAAGAAGCGTGATGAAGAGAAAGAAGAGCCAGAGACTGACGAGGATAACCGCTGGTCAAAGAGAACTCACGCGTTGTTGCAGAACATTGCGACTAAATTGGAAAATCAAAATGGACAGGTTGAACTGGATGAAATGTTGAAGAAGGGAACAAGTCGAAAGGTGGCTGCCGCCAAGTTCTACTCTCTTCTGTGTCTGAAAAAGAATCAGTGCATCGATATCGAACAGAAGGAGCCATACGGAGACATTATGATTAAGGCCGGGCCCAATATCAACATCAACACGATCTAA | |||
ATGGTGATAAGCATCGATGTACCGCTCAAAGCGTCGGAGGAAGCGACTGTGAAGTTCCTATTAGGAATAGTTTTTGGTTCTCACAAGAAACTCGGCTTGCAATCAAATCGTCGTGAGTGCTTCAGACACGATGTTCTTCAAGCAAGCAAGCTCATTCAGTGGATTCTCAGTAACGAGAGGAAAAACAGAAGATCTCTCTCCATTGCGTGTAATTTGGTGTACGGAAACACCATAGTTCTCAGTACTCAAGTTGCTCGACTTCTTCAAGATGCAATTCGTGCTCGAGAGATCGTCGCATTCACTTCGTACCTCGCGGAAGAAGATGAGAGGAAACGAAAAACTCGTGAACAGATGGAAGGTGACAACTCTAAAACACCAAAGAAGAAGAGAAGAACGATGGTTGAGGAATTTCCTCTCACTCCTACCCCGATCAGTGTGGCTCTAAAACAAAACATTACAATGCCAGATGTTCTCAGTCTTCACAAGAACGACCAAATTAACGTTGAAGACGATTTGGCTGCACCAACAATGGAACAACTTGAAATGATGTACGGGATGTTGGAATCAGAAAATCGGAACACAGCGATTGATTTAACATTCATCGATCGATATTCCTCCAACGATTGCCGTCAAAATGTTCATAATCTGAATTTGGAGACTGATTTTCAACGCCCATCTGATGACTTTATCCGGAGCCAGCTCATGACACCTACCAAATCTATTCCACAAGAAGAGGAATTTCAACCAGCCACACACCTGAAGGAAATGCTTCTTTTCCGCCAACTCCCCATCACACTAGACGAAACTGAGAGAAGAAGAAGCATGGAAGAAGAAATGGAGGAAGCGAGGAACTCTGGAATCAACACCGAGTTTATTCCGCCACAACAAATGGATGTTCCACGACTTGTCTCGGAAAACATGGATCTAGATGACGAAGTTTCGATTCCAATAAGAATTCCCAAAGTTCCTCTTAGTGCTACAAAGAAACAAACGTCTGAGAACGAAGGAGCAGAAGAAGGGATCAATTATAAAATTCCATTAAGAGAAATGCATCACATAATGGAAGATTATTCCAGTCTTCACTTCAAAGACCCGGAGCCTCTATACCGAAAGACAAGCAAAGTGATGAATTTAAAAGAGCTGTTGAACCCAATTCCTTACTTCCTTCGAAAAGGATGCAATACAGACATGTGGGATCTGTTCAAGGTGAAAACGAGGAAGTTTGATTCCACAATTGGCCACGATGTATCTGATACTGAAGAAGAGGACGAAGACGAGGAGACTGAGAGAAGAAATCGACTTAAAGCTGAACTTGAGCCCTTGGAGACCATCGACTTGTCACAGATGAAGTTCATGACGACTCCACTGAAGGATAAAAGTCCTATATTGACTCCAGTGCATCGACCGGAAGAAATTGAGTTTCGTGAAGAGCTCGAACTTCCACGGTTTGAACAATTTGAGCCGATGAATGTGAATCCGATTTCTCCAAAAATGGAAGAGCCGGCGCTATTTGAAGACAACTGGAACTCCAAACCGACGTGGTCAAATACAAGTTCTGAAAACATTGCGGATGCGCTCACCATCCGTGGGAATATTATTCGCCAGCTGGATGATAAAAGCCCCTTCGAGGTCACTCTGGATTCGATGATCCCGGTTGCTGCGACATCTCGACGAGAAGCTGCTCGGACATTCTATACAGTTCTTGAGCTCCTCAAAGAACGCAAGATTAAGGCCACTCAACGTGCTCCGTATGAAAATATCGATTTGCTGCTATCAACGGATGATAGTGAAGATATCGACGATCTGGCAATGGCTGATTTCTAA | |||||
ATGTTCTATGCACAGTTCGTTCTCGCCAAAAAGGGACCGTTGGCAAAAGTGTGGCTGGCAGCTCACTGGGAAAAAAAGCTGACAAAGGCGCAAATCTTCGAAACAGATGTTCCCCAAGCGATCGAGGAAGTCATTCGCCCCAAGGTTAAAATGGCGCTCCGAACAGTTGGACATCTTCTCCTTGGAATCGTGAGAATCTACTCGAAGAAGACACGATATCTTCTGGCTGATACAAATGAAGCGTATCAAAAGATGAAGATTAACTTCCGCAACGGATTCAGTTTTGAAGTCGACATTCCAGAGAATGCAGAAATTGAAGAGGATTTCTCAAACTTCATTGATAAGTACAATATCACAGTGCCCGAGTTCCACGATGCCGACTACAATGAGCAGCTCATTATGGCTAATGTGAGCCGTCGTGAAGACATCACCATGAAAGAAACCGTCAATTTCAATGTCGAGTTCAACATTGACGCAGATTTCGATGGGTTCGGTGACGAAGGAGAATCTTGGCAACTCGATCATCTCTACGGATCGGTGGAACCTTTGTCTTTGCGCCCCACTCCTCAGCCAGAATCGTTGATGGAAGTCGAACGAGATCGTGATGTGGCTGCAAATGGAACGGAAATTTCCCGTATAGATGCGGATAGTGTGATTTTCTCCGAAGGACCAACACGTCCAAATCTTATTTTTGACAATCAGGAAGGCGGAAATTTCATGCCTGAAATGAACCTGAAGGTTGAGAATCAAACACTGGAAAACGATGGTGGTGTTGGGCCTGCTGATATGTTCAGCTCAATGATTCATCCCGTCAGAGAGCATGCTGTCGCAGATGTTCAAAACGACGATGGTATGGACTTTGACTATCAACCGTTCGAGCCTGAAAACGTTGAGCCATCGAGACCACAAAGTCCCGAGTCATTTGCCCTGGAGCCTCTAGATGTGGAGCACATGGAAGGACGGAAAAAACGTCAGAGAAAAGCGAGAAAGCTGATTGTCGATGCTGAAACTATGATTTCAAACGACGCTTTCCGAGAGCAACAAGAAGACTTCTCCGATACGATGCGAGTAGTTGAAATGGCGCCTCCTACCAGAAAGATGTTCAATTTATGCGTCAGCGGAGATCTTCAACACCTCAGCCGTGAACCTGGATGCAAAATGTTCAACAGAGAACTCCTTCAAAGATACAGGAGATGTTTGGTCACCCGAGAGTTCGATCTCAATTACACCATGCAAGAGTTGAGCGATAGTTCGAGTTTCACTCCGTCAATGGAAGCTCAAGCTGAGCCATGGGAGGACTTGAACCTCAATGAGGACATTCAAGAAGATATTCAAGCGCAGGGACCAGCCGTTGATGAATTCTTTAATGATGTGCGCATGGATGATGATGATGACAGACAACCAGCTCAGGAAATGGACTTTGGTGACAACTTCGATTTTCCACAAGAAGTAGAACATCAAGAGTGTGCTCCGATCCCTATCCAGAGTGGATTCGCTGGAGAGAACAAAGAGAACGAGGACGCAGAGGATTGGTCTGATCCGTTCGGTTCTTCAAATTCCAGCAGACGTGGCCAGCTTGAAGCCTATGGATTCGGAAATACTTCGACCTACAAGGAAGACGATGGCAAATGGGCGAAACGCGCCAAGCACATTCTAAAGAAAGTCTCCGCGGATATTGAGACTTCGGGACAAGCGGACTTCTCATCTGTCACAGCAACTGCCAAGAATCGCAAGCAAGCTGCAGAGCAATTTTATTCGTTGCTTACCCTGGCCAAGTCTCAAGCAATAAGTGTTGATCAATCAGAGCCATACGGAGAGATCGTAATTCGTCCAGGAGCCAATTTCAAAGAAGCATGTCCACTGAGCTCTCCGAAACCGATGGGACTTGGAAATACAATGGAAAATTCCACTATGAGAACCCCAATGAGACCAGTTTAA | |||||
Experiment | Laboratory | YM | |||
Date | 01 Jun 2003 00:00:00 | ||||
Strain | WBStrain00000001 | ||||
Temperature | 20 | ||||
Delivered_by | Soaking | ||||
Inhibits | Predicted_gene (6) | ||||
Gene | WBGene00004737 | Inferred_automatically | RNAi_primary | ||
WBGene00000592 | Inferred_automatically | RNAi_primary | |||
WBGene00000591 | Inferred_automatically | RNAi_primary | |||
Transcript | K08A8.3a.1 | Inferred_automatically | RNAi_primary | ||
K08A8.3d.1 | Inferred_automatically | RNAi_primary | |||
F08H9.1.1 | Inferred_automatically | RNAi_primary | |||
F10G7.4.1 | Inferred_automatically | RNAi_primary | |||
K08A8.3c.1 | Inferred_automatically | RNAi_primary | |||
K08A8.3b.1 | Inferred_automatically | RNAi_primary | |||
Species | Caenorhabditis elegans | ||||
Reference | WBPaper00005937 | ||||
Phenotype | WBPhenotype:0000050 | Remark | The triple RNAi [coh-1(RNAi); scc-1/coh-2(RNAi); coh-3(RNAi)] caused essentially the same embryonic phenotypes as scc-1/coh-2(RNAi). | ||
Penetrance | Complete | ||||
WBPhenotype:0000773 | Remark | The triple RNAi [coh-1(RNAi); scc-1/coh-2(RNAi); coh-3(RNAi)] caused essentially the same embryonic phenotypes as scc-1/coh-2(RNAi). | |||
Penetrance | Complete | ||||
Remark | paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors used yk226d1 (coh-1), yk72e8 (coh-3) and yk256h5(scc-1/coh-2). | ||||
Method | RNAi |