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WormBase Tree Display for Gene: WBGene00264903

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Name Class

WBGene00264903SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000466700
Molecular_nameSRAE_2000466700
SRAE_2000466700.1
SRP02323
Public_nameSRAE_2000466700
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067731.6692From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
32.0375From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
32.0879From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
32.0994From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
32.4834From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
33.1922From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:00006780.229602From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
0.331436From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
0.332597From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
0.424666From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
0.425809From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
0.442964From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
0.676601From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
0.917704From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:00006801.18533From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006822.02208From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Ortholog (29)
ParalogWBGene00257285Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258528Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258530Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258848Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258853Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259044Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259046Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265561Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267855Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267856Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain. Is an ortholog of C. elegans ttn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000466700
Corresponding_transcriptSRAE_2000466700.1
Other_sequenceJI462571.1
MIC03589_1
HBC11874_1
JI166798.1
SS00703
ES740633.1
JI165988.1
MI07809
MI04758
SSC03618_1
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_parasitic_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene