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WormBase Tree Display for Gene: WBGene00258528

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Name Class

WBGene00258528SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000191600
Molecular_nameSRAE_1000191600
SRAE_1000191600.1
SRP01330
Other_nameSR02335Person_evidenceWBPerson2951
SR02333Person_evidenceWBPerson2951
Public_nameSRAE_1000191600
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067749.4147From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
49.6047From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
54.1477From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
54.3309From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
59.1302From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
59.4144From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:000067815.0236From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
15.3341From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
15.6578From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
17.8479From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
18.4821From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
19.7779From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
21.7796From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
22.0467From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:000068060.9749From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006825.11523From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
OrthologWBGene00222353Brugia malayiFrom_analysisWormBase-Compara
WBGene00248537Onchocerca volvulusFrom_analysisWormBase-Compara
Cang_2012_03_13_11895.g23467Caenorhabditis angariaFrom_analysisWormBase-Compara
WBGene00288764Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00257285Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258530Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258848Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258853Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259044Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259046Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264903Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265561Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267855Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267856Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of B. malayi Bm6219.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000191600
Corresponding_transcriptSRAE_1000191600.1
Other_sequence (29)
Experimental_infoExpression_clusterWBPaper00050919:down_parasitic_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene