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WormBase Tree Display for Gene: WBGene00258848

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Name Class

WBGene00258848SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000223400
Molecular_nameSRAE_1000223400
SRAE_1000223400.1
SRP02102
Public_nameSRAE_1000223400
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067714.0806From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
14.7074From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
15.3153From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
15.5315From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
15.5817From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
15.8202From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:00006782.90184From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
5.34853From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
7.32789From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
7.42843From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
7.46028From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
7.49056From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
7.55906From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
7.89907From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:00006803.1458From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.196988From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Ortholog (15)
ParalogWBGene00257285Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258528Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258530Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258853Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259044Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259046Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264903Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265561Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267855Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267856Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin I-set; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; and Immunoglobulin subtype. Is an ortholog of B. malayi Bm6220.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000223400
Corresponding_transcriptSRAE_1000223400.1
Other_sequence (16)
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
WBPaper00050919:down_parasitic_vs_free-living_mRNA
MethodGene