WormBase Tree Display for Gene: WBGene00239946

WBGene00239946 SMap: S_parent: Sequence: OVOC_OM1b_125
  Identity: Version: 2
    Name: CGC_name: Ovo-ttx-3 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC3137
      Molecular_name: OVOC3137
        OVOC3137.1
        OVP02784
        OVOC3137.2
      Public_name: Ovo-ttx-3
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:33 WBPerson4055 Name_change: CGC_name: Ovo-ttx-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttx
    RNASeq_FPKM: WBls:0000101 2.57267 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        5.38667 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 (16)
      WBls:0000107 2.32858 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 1.43829 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        3.82787 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        4.11404 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        5.93128 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 2.44149 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        3.54585 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        4.65021 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    GO_annotation: 00253916
    Ortholog: WBGene00163466 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00023690 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00222947 Brugia malayi From_analysis: WormBase-Compara
      WBGene00006654 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00137173 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g2713 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2864 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19534 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3561 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17440 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13458 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14606 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11825 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23021 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00093.g4124 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ttx-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18670 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00215.g7225 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03524 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025105 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g10415 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0180600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00051043 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00098361 Pristionchus pacificus From_analysis: WormBase-Compara
      chrX_pilon.g20128 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00255870 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00295238 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296879 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00236824 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00237286 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238146 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238705 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239469 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239561 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239708 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240820 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242419 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans ttx-3. In C. elegans, ttx-3 is involved in several processes, including olfactory learning; regulation of developmental process; and response to temperature stimulus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC3137
    Corresponding_transcript: OVOC3137.1
      OVOC3137.2
    Other_sequence: JI479595.1
      Acan_isotig13660
      JI171393.1
      Dviv_isotig25707
      JI479075.1
      JI466837.1
  Method: Gene