WormBase Tree Display for Gene: WBGene00086561
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| WBGene00086561 | SMap | S_parent | Sequence | K01A2 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | K01A2.12 | ||||||
| Molecular_name | K01A2.12 | |||||||
| K01A2.12.1 | ||||||||
| CE19518 | ||||||||
| Other_name | CELE_K01A2.12 | Accession_evidence | NDB | BX284602 | ||||
| Public_name | K01A2.12 | |||||||
| DB_info | Database | WormFlux | gene | WBGene00086561 | ||||
| NDB | locus_tag | CELE_K01A2.12 | ||||||
| NCBI | gene | 7040176 | ||||||
| RefSeq | protein | NM_001136346.1 | ||||||
| TREEFAM | TREEFAM_ID | TF319130 | ||||||
| TrEMBL | UniProtAcc | G5EFF3 | ||||||
| UniProt_GCRP | UniProtAcc | G5EFF3 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 18 Jul 2008 16:14:13 | WBPerson1867 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele | WBVar01499702 | |||||||
| WBVar02122083 | ||||||||
| WBVar01500106 | ||||||||
| WBVar02122349 | ||||||||
| WBVar02121836 | ||||||||
| WBVar02122426 | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog (13) | ||||||||
| Paralog | WBGene00019278 | |||||||
| WBGene00019279 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | ||||||||
| WBGene00019282 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | ||||||||
| WormBase-Compara | ||||||||
| WBGene00019283 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | ||||||||
| Structured_description | Automated_description | Enriched in DA neuron; GABAergic neurons; VA neuron; and muscle cell based on RNA-seq and microarray studies. Is affected by several genes including daf-16; dpy-10; and gld-1 based on RNA-seq and microarray studies. Is affected by ten chemicals including Cry5B; Oligosaccharides; and Quercetin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | K01A2.12 | ||||||
| Corresponding_transcript | K01A2.12.1 | |||||||
| Experimental_info | RNAi_result | WBRNAi00085206 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00049592 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00085213 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00016375 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00085212 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00016374 | Inferred_automatically | RNAi_primary | ||||||
| Expr_pattern | Expr1026018 | |||||||
| Expr1153314 | ||||||||
| Microarray_results | 172468_x_at | |||||||
| 172526_x_at | ||||||||
| 172541_x_at | ||||||||
| 194226_x_at | ||||||||
| 194249_x_at | ||||||||
| Aff_K01A2.9 | ||||||||
| Expression_cluster (45) | ||||||||
| Map_info | Positive | Positive_clone | K01A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | II | -15.6275 | ||||||
| Method | Gene |
