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WormBase Tree Display for Gene: WBGene00072784

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Name Class

WBGene00072784SMapS_parentSequenceCrem_Contig1173
IdentityVersion7
NameCGC_nameCre-sorb-1.1From_analysisInferred_from_orthology
Sequence_nameCRE06221
Molecular_nameCRE06221
CRE06221.1
RP20444
Other_namecr01.sctg461.wum.1
Public_nameCre-sorb-1.1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
203 Jul 2008 11:46:39WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE06221
Other_namecr01.sctg461.wum.1
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-sorb-1.1
408 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:27WBPerson1983Name_changeCGC_nameCre-sorb-1.1
628 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
728 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCre-sorb-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsorb
RNASeq_FPKMWBls:00000040.152708From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.628229From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.10375From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.091849From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
3.5434From_analysisRNASeq.remanei.WBls:0000027.control_mean
4.19915From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4.35806From_analysisRNASeq.remanei.WBls:0000027.control_median
4.51697From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.36562From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000380.186008From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.9208From_analysisRNASeq.remanei.WBls:0000038.control_mean
4.25484From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
4.32156From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.064763From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.122861From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.181123From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.187047From_analysisRNASeq.remanei.WBls:0000041.control_median
0.192972From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.20362From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.246715From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.413283From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (11)
WBls:00001010.472243From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.53176From_analysisRNASeq.remanei.total_over_all_stages.control_mean
OrthologWBGene00012891Caenorhabditis elegansFrom_analysisOMA
WormBase-Compara
WBGene00040942Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00149939Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00113724Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00141216Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148508Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00226832Brugia malayiFrom_analysisWormBase-Compara
WBGene00241390Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g10777Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14958Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6075Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7465Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g9656Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g10094Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5908Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21302Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g7783Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00130.g5167Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g12707Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16375Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01504.g21322Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_013155Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02830Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g23208Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40268500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12372Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267341Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297715Trichuris murisFrom_analysisWormBase-Compara
WBGene00301337Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00072565Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00072786Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00051918Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00055206Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00060431Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075990Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00076857Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Endophilin-A; SH3 domain; SH3-like domain superfamily; and Variant SH3 domain. Is an ortholog of C. elegans sorb-1. In C. elegans, sorb-1 is involved in maintenance of mitochondrion location and sarcomere organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE06221
Corresponding_transcriptCRE06221.1
Other_sequenceEY473508.1
JI479003.1
JI470230.1
PPC01858_1
PP00167
XIC03249_1
Hbac_isotig03147
JO468152.1
Experimental_infoExpr_patternExpr1117881
Microarray_resultsGPL14146_CRE06221_443-502_0.916_14_A
Remark[190208 pad] The CGC name Cre-sorb-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cre-sorb-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene