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WormBase Tree Display for Gene: WBGene00060431

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Name Class

WBGene00060431SMapS_parentSequenceCrem_Contig11
IdentityVersion3
NameCGC_nameCre-unc-57From_analysisInferred_from_orthology
Sequence_nameCRE03667
Molecular_nameCRE03667
CRE03667.1
RP02956
Other_namecr01.sctg18.wum.74
Public_nameCre-unc-57
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:40WBPerson2970Name_changeCGC_nameCre-unc-57
303 Jul 2008 11:45:32WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE03667
Other_namecr01.sctg18.wum.74
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000481.1578From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
87.3717From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
93.5855From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002735.1046From_analysisRNASeq.remanei.WBls:0000027.control_mean
41.6788From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
43.4414From_analysisRNASeq.remanei.WBls:0000027.control_median
45.204From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
45.6099From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
7.92574From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003813.837From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
35.2186From_analysisRNASeq.remanei.WBls:0000038.control_mean
43.0569From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
48.7619From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004142.2399From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
42.6849From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
43.7635From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
63.0041From_analysisRNASeq.remanei.WBls:0000041.control_median
64.9146From_analysisRNASeq.remanei.WBls:0000041.control_mean
82.2446From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
86.2807From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
92.2738From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010145.6813From_analysisRNASeq.remanei.total_over_all_stages.control_median
51.4736From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00155852
Ortholog (30)
ParalogWBGene00051918Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00055206Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072565Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072784Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072786Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075990Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00076857Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in cytoplasm. Is an ortholog of C. elegans unc-57. In C. elegans, unc-57 is involved in clathrin-dependent endocytosis and necroptotic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE03667
Corresponding_transcriptCRE03667.1
Other_sequence (57)
Experimental_infoExpr_patternExpr1108835
Microarray_resultsGPL14146_CRE03667_1037-1096_0.954_2_B
GPL14146_CRE03667_1140-1199_0.958_1_A
GPL14146_CRE03667_784-843_0.898_28_C
MethodGene