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WormBase Tree Display for Gene: WBGene00241390

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Name Class

WBGene00241390SMapS_parentSequenceOVOC_OM2_37
IdentityVersion2
NameCGC_nameOvo-sorb-1From_analysisInferred_from_orthology
Sequence_nameOVOC4581
Molecular_nameOVOC4581
OVOC4581.1
OVP11699
Public_nameOvo-sorb-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-sorb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsorb
RNASeq_FPKMWBls:000010111.5175From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
13.338From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (16)
WBls:000010715.0338From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010813.1619From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.18537From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
8.73528From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
9.85857From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006645.52023From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
5.54912From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
5.57801From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (34)
ParalogWBGene00237374Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239628Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246338Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SH3 domain; SH3-like domain superfamily; and Variant SH3 domain. Is an ortholog of C. elegans sorb-1. In C. elegans, sorb-1 is involved in maintenance of mitochondrion location and sarcomere organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC4581
Corresponding_transcriptOVOC4581.1
Other_sequence (33)
MethodGene