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WormBase Tree Display for Gene: WBGene00241390

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Name Class

WBGene00241390SMapS_parentSequenceOVOC_OM2_37
IdentityVersion2
NameCGC_nameOvo-sorb-1From_analysisInferred_from_orthology
Sequence_nameOVOC4581
Molecular_nameOVOC4581
OVOC4581.1
OVP11699
Public_nameOvo-sorb-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-sorb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsorb
RNASeq_FPKMWBls:000010111.5175From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
13.338From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:000010410.4598From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
13.4031From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
13.5141From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
14.0099From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
14.3784From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
15.3076From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
15.3496From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
15.804From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
18.3994From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
18.8418From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
2.40648From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
24.2628From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
27.7399From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
2.99472From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
3.65052From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
3.92756From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
WBls:000010715.0338From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010813.1619From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.18537From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
8.73528From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
9.85857From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006645.52023From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
5.54912From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
5.57801From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00141216Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148508Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149939Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00040942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226832Brugia malayiFrom_analysisWormBase-Compara
WBGene00012891Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g10777Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14958Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6075Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7465Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g9656Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g10094Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5908Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21302Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g7783Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00130.g5167Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g12707Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16375Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01504.g21322Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_013155Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02830Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g23208Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23210Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40268500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00072565Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072784Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072786Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075990Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00076857Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00113724Pristionchus pacificusFrom_analysisWormBase-Compara
chrIV_pilon.g12372Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267341Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297715Trichuris murisFrom_analysisWormBase-Compara
WBGene00301337Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237374Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239628Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246338Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SH3 domain; SH3-like domain superfamily; and Variant SH3 domain. Is an ortholog of C. elegans sorb-1. In C. elegans, sorb-1 is involved in maintenance of mitochondrion location and sarcomere organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC4581
Corresponding_transcriptOVOC4581.1
Other_sequenceTcol_isotig08788
EX564484.1
JI477572.1
JI171101.1
JI472905.1
FG587996.1
HCC02333_1
OF01591
TSC01172_1
TS03332
EY473508.1
JI474405.1
JI479003.1
JI470230.1
JI462092.1
FG353481.1
EX545944.1
Acan_isotig10226
EX542536.1
ACC36550_1
Name_isotig03195
Tcol_isotig08787
Oden_isotig06654
XIC03249_1
Hbac_isotig03147
ACC18981_1
XI02604
Oden_isotig06653
TS03331
BMC02052_1
FG584438.1
HC03968
JO468152.1
MethodGene