WormBase Tree Display for Gene: WBGene00072784

WBGene00072784 SMap: S_parent: Sequence: Crem_Contig1173
  Identity: Version: 7
    Name: CGC_name: Cre-sorb-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE06221
      Molecular_name: CRE06221
        CRE06221.1
        RP20444
      Other_name: cr01.sctg461.wum.1
      Public_name: Cre-sorb-1.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:39 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE06221
                Other_name: cr01.sctg461.wum.1
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-sorb-1.1
        4 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cre-sorb-1.1
        6 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cre-sorb-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sorb
    RNASeq_FPKM: WBls:0000004 0.152708 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.628229 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.10375 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.091849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        3.5434 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        4.19915 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        4.35806 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        4.51697 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        5.36562 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.186008 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.9208 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.25484 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.32156 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.064763 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.122861 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.181123 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.187047 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.192972 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.20362 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.246715 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.413283 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (11)
      WBls:0000101 0.472243 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.53176 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (29)
    Paralog: WBGene00072565 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00072786 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051918 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00055206 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00060431 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075990 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00076857 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Endophilin-A; SH3 domain; SH3-like domain superfamily; and Variant SH3 domain. Is an ortholog of C. elegans sorb-1. In C. elegans, sorb-1 is involved in maintenance of mitochondrion location and sarcomere organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE06221
    Corresponding_transcript: CRE06221.1
    Other_sequence: EY473508.1
      JI479003.1
      JI470230.1
      PPC01858_1
      PP00167
      XIC03249_1
      Hbac_isotig03147
      JO468152.1
  Experimental_info: Expr_pattern: Expr1117881
    Microarray_results: GPL14146_CRE06221_443-502_0.916_14_A
  Remark: [190208 pad] The CGC name Cre-sorb-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cre-sorb-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene