WormBase Tree Display for Gene: WBGene00064391

WBGene00064391 SMap: S_parent: Sequence: Crem_Contig52
  Identity: Version: 3
    Name: CGC_name: Cre-unc-112 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04985
      Molecular_name: CRE04985
        CRE04985.1
        RP06701
      Other_name: cr01.sctg48.wum.56
      Public_name: Cre-unc-112
    Species: Caenorhabditis remanei
    History: Version_change (3)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 10.3654 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        12.5723 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        14.7792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 30.9973 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        32.4116 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        36.0131 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        39.6146 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        42.7265 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        9.23636 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 10.0482 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        36.353 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        45.5742 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        53.4367 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 12.5216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        16.4504 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        16.5605 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        19.3521 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        19.7627 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        22.9649 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        23.6072 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        24.0083 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 16.5054 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        21.0383 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00159709
    Ortholog: WBGene00006836 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00027203 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00158651 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135987 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223076 Brugia malayi From_analysis: WormBase-Compara
      WBGene00243942 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00097594 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g1990 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10368 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1173 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7370 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17736 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18666 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15624 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2031 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g14026 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g23708 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g7480 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23667 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00125.g5037 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_04890.g19193 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_12012.g23526 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-112 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15915 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00361.g10114 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_02618.g27253 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11922 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017456 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00267 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g23283 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50349400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16592 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00257862 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00295078 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00060491 Caenorhabditis remanei From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be involved in integrin-mediated signaling pathway. Is an ortholog of C. elegans unc-112. In C. elegans, unc-112 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of supramolecular fiber organization; and regulation of engulfment of apoptotic cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04985
    Corresponding_transcript: CRE04985.1
    Other_sequence (86)
  Experimental_info: Expr_pattern: Expr1110466
    Microarray_results: GPL14146_CRE04985_1513-1572_0.906_28_C
      GPL14146_CRE04985_1808-1867_0.939_5_A
      GPL14146_CRE04985_1841-1900_0.928_10_B
  Method: Gene