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WormBase Tree Display for CDS: CRE04985

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Name Class

CRE04985SMapS_parentSequenceCrem_Contig52
StructureSource_exons183
133197
26522919
29704150
42004600
46904854
DB_infoDatabaseTREEFAMTREEFAM_IDTF314677
DB_remarkCRE-UNC-112 protein; contains similarity to Pfam domains PF00169 (PH domain), PF00373 (FERM central domain), PF18124 (Kindlin-2 N-terminal domain); contains similarity to Interpro domains IPR040790 (Kindlin-2, N-terminal), IPR019748 (FERM central domain), IPR001849 (Pleckstrin homology domain), IPR037843 (Kindlin/fermitin), IPR011993 (PH-like domain superfamily), IPR035963 (FERM superfamily, second domain), IPR019749 (Band 4.1 domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00064391
Corresponding_transcriptCRE04985.1
Corresponding_proteinRP06701
Corresponding_oligo_setGPL14146_CRE04985_1513-1572_0.906_28_C
GPL14146_CRE04985_1808-1867_0.939_5_A
GPL14146_CRE04985_1841-1900_0.928_10_B
Matching_cDNADY527005Inferred_automaticallytranscript_builder.pl
DR781136Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14146_CRE04985_1513-1572_0.906_28_C
GPL14146_CRE04985_1808-1867_0.939_5_A
GPL14146_CRE04985_1841-1900_0.928_10_B
RNASeq_FPKMWBls:000000410.3654From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
14.7792From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (54)
WBls:000002732.4116From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
39.6146From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
42.7265From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
9.23636From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003810.0482From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
45.5742From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
53.4367From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004112.5216From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
16.4504From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
16.5605From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
22.9649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
23.6072From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
24.0083From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:000006312.7256From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
13.5783From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
13.9068From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
14.0318From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
14.1527From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
16.2532From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
18.4922From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
19.5331From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
23.418From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
26.5986From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
Methodcurated