| CRE04985 | SMap | S_parent | Sequence | Crem_Contig52 |
|---|
| Structure | Source_exons | 1 | 83 |
| | | 133 | 197 |
| | | 2652 | 2919 |
| | | 2970 | 4150 |
| | | 4200 | 4600 |
| | | 4690 | 4854 |
| DB_info | Database | TREEFAM | TREEFAM_ID | TF314677 |
| | DB_remark | CRE-UNC-112 protein; contains similarity to Pfam domains PF00169 (PH domain), PF00373 (FERM central domain), PF18124 (Kindlin-2 N-terminal domain); contains similarity to Interpro domains IPR040790 (Kindlin-2, N-terminal), IPR019748 (FERM central domain), IPR001849 (Pleckstrin homology domain), IPR037843 (Kindlin/fermitin), IPR011993 (PH-like domain superfamily), IPR035963 (FERM superfamily, second domain), IPR019749 (Band 4.1 domain) |
| Origin | From_laboratory | RW |
| | Species | Caenorhabditis remanei |
| Properties | Coding | CDS |
| | | Prediction_status | Partially_confirmed |
| Visible | Gene | WBGene00064391 |
| | Corresponding_transcript | CRE04985.1 |
| | Corresponding_protein | RP06701 |
| | Corresponding_oligo_set | GPL14146_CRE04985_1513-1572_0.906_28_C |
| | | GPL14146_CRE04985_1808-1867_0.939_5_A |
| | | GPL14146_CRE04985_1841-1900_0.928_10_B |
| | Matching_cDNA | DY527005 | Inferred_automatically | transcript_builder.pl |
| | | DR781136 | Inferred_automatically | transcript_builder.pl |
| | Microarray_results | GPL14146_CRE04985_1513-1572_0.906_28_C |
| | | GPL14146_CRE04985_1808-1867_0.939_5_A |
| | | GPL14146_CRE04985_1841-1900_0.928_10_B |
| | RNASeq_FPKM | WBls:0000004 | 10.3654 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881 |
| | | | 14.7792 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882 |
| | | WBls:0000024 | 10.2301 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996 |
| | | | 10.4185 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017 |
| | | | 10.9634 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006 |
| | | | 11.552 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007 |
| | | | 11.8451 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991 |
| | | | 12.0594 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021 |
| | | | 12.8717 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989 |
| | | | 12.9943 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020 |
| | | | 13.5749 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988 |
| | | | 13.7898 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798 |
| | | | 13.7938 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003 |
| | | | 13.9895 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011 |
| | | | 14.2125 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014 |
| | | | 14.9892 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001 |
| | | | 14.996 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009 |
| | | | 15.7888 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002 |
| | | | 18.2251 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998 |
| | | | 18.3552 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008 |
| | | | 18.3578 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000 |
| | | | 18.9578 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005 |
| | | | 19.0694 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802 |
| | | | 21.784 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801 |
| | | | 22.0774 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311803 |
| | | | 22.1541 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800 |
| | | | 23.0008 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010 |
| | | | 23.8727 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799 |
| | | | 24.7634 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999 |
| | | | 26.8459 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004 |
| | | | 28.614 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990 |
| | | | 37.1976 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992 |
| | | | 39.8112 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993 |
| | | | 4.65111 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018 |
| | | | 4.6751 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019 |
| | | | 47.4604 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987 |
| | | | 48.2507 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986 |
| | | | 5.70431 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013 |
| | | | 7.36149 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012 |
| | | | 7.8088 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015 |
| | | | 8.00779 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016 |
| | | | 9.07369 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997 |
| | | | 9.22466 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994 |
| | | | 9.59777 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995 |
| | | | 14.5466 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481 |
| | | | 15.5973 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486 |
| | | | 16.2089 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488 |
| | | | 17.0222 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489 |
| | | | 17.2575 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485 |
| | | | 17.8942 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487 |
| | | | 21.7073 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483 |
| | | | 25.7069 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482 |
| | | | 25.8857 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484 |
| | | | 35.9094 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479 |
| | | | 36.6098 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480 |
| | | | 38.026 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490 |
| | | WBls:0000027 | 32.4116 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885 |
| | | | 39.6146 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884 |
| | | | 42.7265 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883 |
| | | | 9.23636 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082 |
| | | WBls:0000038 | 10.0482 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083 |
| | | | 45.5742 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879 |
| | | | 53.4367 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880 |
| | | WBls:0000041 | 12.5216 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972 |
| | | | 16.4504 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973 |
| | | | 16.5605 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971 |
| | | | 22.9649 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975 |
| | | | 23.6072 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974 |
| | | | 24.0083 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976 |
| | | WBls:0000063 | 12.7256 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886 |
| | | | 13.5783 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890 |
| | | | 13.9068 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888 |
| | | | 14.0318 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889 |
| | | | 14.1527 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892 |
| | | | 16.2532 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887 |
| | | | 18.4922 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893 |
| | | | 19.5331 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891 |
| | | | 23.418 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894 |
| | | | 26.5986 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895 |
| Method | curated |
