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WormBase Tree Display for Gene: WBGene00027203

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Name Class

WBGene00027203SMapS_parentSequencecb25.fpc0090
IdentityVersion2
NameCGC_nameCbr-unc-112From_analysisInferred_from_orthology
Sequence_nameCBG04558
Molecular_nameCBG04558
CBG04558.1
CBP01198
Other_nameCBG_04558Accession_evidenceNDBHE601135
Public_nameCbr-unc-112
DB_infoDatabaseNDBlocus_tagCBG_04558
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-112
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000228.2321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
45.7214From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
47.8508From_analysisRNASeq.briggsae.WBls:0000002.control_mean
69.599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
17.4237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
36.9767From_analysisRNASeq.briggsae.WBls:0000002.control_median
40.244From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000319.6306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
23.8391From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
28.0475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
23.8452From_analysisRNASeq.briggsae.WBls:0000003.control_mean
23.8574From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004102.452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
102.703From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
102.955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
100.632From_analysisRNASeq.briggsae.WBls:0000004.control_mean
102.603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
95.2185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
99.9338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027109.375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
18.4215From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
44.44From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.52361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
44.1153From_analysisRNASeq.briggsae.WBls:0000027.control_median
50.7823From_analysisRNASeq.briggsae.WBls:0000027.control_mean
69.8092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003546.9195From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
126.645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
34.2741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
36.9324From_analysisRNASeq.briggsae.WBls:0000038.control_median
39.5906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
52.6729From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004113.7982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
18.2505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
18.8129From_analysisRNASeq.briggsae.WBls:0000041.control_median
19.3753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
20.2697From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.6549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
20.7577From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.1401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
22.5446From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.0487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.5417From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.8221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.0363From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
27.0423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
28.808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
22.7085From_analysisRNASeq.briggsae.WBls:0000063.control_mean
26.5393From_analysisRNASeq.briggsae.WBls:0000063.control_median
28.5425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010128.808From_analysisRNASeq.briggsae.total_over_all_stages.control_median
42.055From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
29.2314From_analysisRNASeq.briggsae.total_over_all_stages.control_median
45.0309From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130676
Ortholog (34)
Structured_descriptionAutomated_descriptionPredicted to be involved in integrin-mediated signaling pathway. Is an ortholog of C. elegans unc-112. In C. elegans, unc-112 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of supramolecular fiber organization; and regulation of engulfment of apoptotic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04558
Corresponding_CDS_historyCBG04558:bp194
Corresponding_transcriptCBG04558.1
Other_sequence (84)
Experimental_infoExpr_patternExpr1068393
Microarray_resultsGPL8303_CB6_WBGene00027203_A
GPL8303_CB6_WBGene00027203_B
GPL14143_CBG04558_1517-1576_0.881_25_C
GPL14143_CBG04558_1783-1842_0.922_10_A
GPL14143_CBG04558_1857-1916_0.937_6_B
MethodGene