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WormBase Tree Display for Gene: WBGene00097594

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Name Class

WBGene00097594SMapS_parentSequencePPA_ChrI
IdentityVersion5
NameCGC_namePpa-unc-112From_analysisInferred_from_orthology
Sequence_namePPA08040
Molecular_namePPA08040
PPA08040.1
PP75439
Other_nameGENEPREDICTION_SNAP300000064525
UMM-S278-11.3Person_evidenceWBPerson606
Public_namePpa-unc-112
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
208 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
308 May 2019 10:09:22WBPerson1983Name_changeCGC_namePpa-unc-112
428 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
528 Jul 2021 11:12:27WBPerson1983Name_changeCGC_namePpa-unc-112
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000324.52254From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010121.3641From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
4.52254From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
8.62888From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00177133
Ortholog (34)
Structured_descriptionAutomated_descriptionPredicted to be involved in integrin-mediated signaling pathway. Is an ortholog of C. elegans unc-112. In C. elegans, unc-112 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of supramolecular fiber organization; and regulation of engulfment of apoptotic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSPPA08040
Corresponding_CDS_historyPPA08040:pp270
Corresponding_transcriptPPA08040.1
Other_sequence (83)
Experimental_infoMicroarray_resultsGPL14372_Probes_4058
GPL14372_Probes_43046
GPL14372_Probes_43047
GPL14372_Probes_43048
GPL14372_Probes_43049
GPL14372_Probes_43050
Remark[190208 pad] The CGC name Ppa-unc-112 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-unc-112 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene