WormBase Tree Display for Gene: WBGene00062415

WBGene00062415 SMap: S_parent: Sequence: Crem_Contig36
  Identity: Version: 4
    Name: CGC_name: Cre-tiam-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE23954
      Molecular_name: CRE23954
        CRE23954.1
        RP37068
      Other_name: cr01.sctg31.wum.121
        Cre-cgef-2 From_analysis: Inferred_from_orthology
      Public_name: Cre-tiam-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:45 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE23954
                Other_name: cr01.sctg31.wum.121
        3 18 Aug 2010 13:59:01 WBPerson2970 Name_change: CGC_name: Cre-cgef-2
        4 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cre-tiam-1
                Other_name: Cre-cgef-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tiam
    RNASeq_FPKM: WBls:0000004 0.565565 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.670978 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.776391 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.293929 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.86205 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        3.20253 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        3.4992 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3.79587 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        4.15587 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.396835 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        5.40558 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        6.62362 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        9.1963 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 1.02541 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.44582 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.65778 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2.06755 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.08999 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.47732 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.73702 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.19658 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (11)
      WBls:0000101 1.68992 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2.19745 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00157847
    Ortholog (31)
    Paralog: WBGene00058199 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00060975 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00058197 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00058198 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00058949 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00062359 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065297 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00070872 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00077298 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans tiam-1. In C. elegans, tiam-1 is involved in small GTPase mediated signal transduction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE23954
    Corresponding_transcript: CRE23954.1
    Other_sequence (17)
  Experimental_info: Expr_pattern: Expr1110263
    Microarray_results: GPL14146_CRE23954_1062-1121_0.912_10_C
      GPL14146_CRE23954_1687-1746_0.951_3_B
      GPL14146_CRE23954_942-1001_0.749_103_A
  Method: Gene