WormBase Tree Display for Gene: WBGene00077298

WBGene00077298 SMap: S_parent: Sequence: Crem_Contig25
  Identity: Version: 3
    Name: CGC_name: Cre-vav-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE16749
      Molecular_name: CRE16749
        CRE16749.1
        RP41353
      Other_name: cr01.sctg60.wum.64
      Public_name: Cre-vav-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 14:39:32 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:53 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE16749
                Other_name: cr01.sctg60.wum.64
        3 04 Jul 2008 11:06:46 WBPerson4055 Name_change: CGC_name: Cre-vav-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vav
    RNASeq_FPKM: WBls:0000004 10.1936 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        8.24166 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        9.21763 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (53)
      WBls:0000027 10.6288 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        13.6479 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.98649 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        8.83699 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        9.08476 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        9.85678 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 1.00574 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        5.35606 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        7.44007 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        7.62238 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 4.32034 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.59665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        4.93654 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        5.43762 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        5.64016 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        5.93871 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        6.61644 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        7.43228 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 4.86871 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        5.35069 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00169274
    Ortholog (36)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans vav-1. In C. elegans, vav-1 is involved in several processes, including negative regulation of Notch signaling pathway; positive regulation of nematode male tail tip morphogenesis; and regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE16749
    Corresponding_transcript: CRE16749.1
    Other_sequence: Dviv_isotig24605
      FK806571.1
      Oden_isotig19059
      Hbac_isotig02150
      ACC03528_2
      FC551264.1
      Acan_isotig07573
  Experimental_info: Expr_pattern: Expr1100853
    Microarray_results: GPL14146_CRE16749_2258-2317_0.852_56_A
      GPL14146_CRE16749_2535-2594_0.930_4_C
      GPL14146_CRE16749_2914-2973_0.939_1_B
  Method: Gene