WormBase Tree Display for Gene: WBGene00058199

WBGene00058199 SMap: S_parent: Sequence: Crem_Contig15
  Identity: Version: 5
    Name: CGC_name: Cre-cgef-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07541
      Molecular_name: CRE07541
        CRE07541.1
        RP48357
      Other_name: cr01.sctg11.wum.51
        cr01.sctg11.wum.51.2
        Cre-tag-150
      Public_name: Cre-cgef-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-tag-150
        3 03 Jul 2008 11:45:16 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07541
                Other_name: cr01.sctg11.wum.51
        4 03 Jul 2008 11:48:44 WBPerson4055 Event: Acquires_merge: WBGene00058200
              Name_change: Other_name: cr01.sctg11.wum.51.2
        5 18 Jul 2008 10:56:35 WBPerson2970 Name_change: CGC_name: Cre-cgef-1
                Other_name: Cre-tag-150
      Acquires_merge: WBGene00058200
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cgef
    RNASeq_FPKM: WBls:0000004 18.9946 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        19.8941 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        20.7935 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 13.6926 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        13.76 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        15.2308 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        16.7015 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        19.3911 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.91769 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 11.1027 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        12.9642 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        13.9047 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        6.43908 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 3.15763 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        3.37219 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.62101 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        5.08965 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        5.34886 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        6.07671 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        6.41212 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        6.89825 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 5.75052 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        7.76728 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00153637
    Ortholog (42)
    Paralog: WBGene00060975 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00062415 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00058197 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00058198 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00058949 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00062359 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065297 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00070872 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00077298 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans cgef-1. In C. elegans, cgef-1 is involved in protein localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE07541
    Corresponding_transcript: CRE07541.1
    Other_sequence (26)
  Experimental_info: Expr_pattern: Expr1114948
    Microarray_results: GPL14146_CRE07541_1654-1713_0.935_6_C
      GPL14146_CRE07541_1764-1823_0.945_2_A
      GPL14146_CRE07541_1913-1972_0.910_19_B
  Method: Gene