WormBase Tree Display for Gene: WBGene00050959

WBGene00050959 SMap: S_parent: Sequence: F26F2
  Identity: Version: 1
    Name: Sequence_name: F26F2.9
      Molecular_name: F26F2.9
        F26F2.9.1
        CE41800
      Other_name: CELE_F26F2.9 Accession_evidence: NDB BX284605
      Public_name: F26F2.9
    DB_info: Database: AceView gene F26F2.9
        WormFlux gene WBGene00050959
        NDB locus_tag CELE_F26F2.9
        NCBI gene 6418734
        RefSeq protein NM_001129461.1
        TREEFAM TREEFAM_ID TF322777
        TrEMBL UniProtAcc Q9XV57
        UniProt_GCRP UniProtAcc Q9XV57
    Species: Caenorhabditis elegans
    History: Version_change: 1 01 Nov 2007 11:30:18 WBPerson4025 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (13)
    RNASeq_FPKM (74)
    Ortholog: chrV_pilon.g18117 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00009167 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00009169 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00009170 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00219309 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Is affected by several genes including nhr-49; bar-1; and mir-35 based on microarray and RNA-seq studies. Is affected by four chemicals including Psoralens; allantoin; and Rifampin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F26F2.9
    Corresponding_transcript: F26F2.9.1
  Experimental_info: Expr_pattern: Expr1149580
    Microarray_results: 172264_x_at
      172272_x_at
    Expression_cluster: WBPaper00045257:bar-1(ga80)_upregulated
      WBPaper00045401:N.parisii_8h_upregulated
      WBPaper00045401:N.parisii_30h_upregulated
      WBPaper00045918:96h_infection_recovery_downregulated
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00053020:OrsayVirus-infection_upregulated
      WBPaper00053020:OrsayVirus-infection_upregulated_microarray
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00061319:pnp-1(jy90)_upregulated
      WBPaper00061319:pnp-1(jy121)_upregulated
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00064532:pals-22(jy3)_upregulated
      WBPaper00065086:JU1400_N.ausubeli_regulated
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065086:JU1400_N.ironsii_regulated
      WBPaper00065086:JU1400_N.parisii_regulated
      WBPaper00065086:N2_N.ausubeli_regulated
      WBPaper00065086:N2_N.ferruginous_regulated
      WBPaper00065086:N2_N.ironsii_regulated
      WBPaper00065086:N2_N.parisii_regulated
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00035227:heat_shock_regulated
      WBPaper00040876:mir-35_upregulated
      WBPaper00042574:N2_OrsayVirus_upregulated
      WBPaper00042574:rde-1(ne219)_OrsayVirus_upregulated
      WBPaper00044535:male_upregulated
      WBPaper00045401:N.parisii_34h_upregulated_N2
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
  Map_info: Positive: Positive_clone: F26F2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 25.0134
  Method: Gene